Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28]
4,312 sequences; 256,132,296 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3803 132 3e-26
>seq3803
Length=782546
Score = 132 bits (146), Expect = 3e-26
Identities = 169/232 (73%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || |||||||| | || || | |||||||||| ||| || || || ||||| |
Sbjct 742753 CATT-CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGT 742695
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| |||| ||| | || || | ||||||||| || ||||| || | |||||| || |
Sbjct 742694 CGCTCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAG 742635
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| |||||||||||| ||| ||| |||||||||| | || || | ||
Sbjct 742634 GGGGGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTT 742575
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || | ||||| ||||| |||||||| || || ||||| ||||||||
Sbjct 742574 CGACCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523
Score = 129 bits (142), Expect = 4e-25
Identities = 169/233 (73%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || |||||||| | || || | |||||||| |||||| || || ||||| |
Sbjct 742525 CATT-CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGT 742467
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| |||| ||| | || || | ||||||||||| || || || || ||||| || |
Sbjct 742466 CGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTG 742407
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|||| ||||||||||||| |||||| ||||||||| | | |||||| | ||
Sbjct 742406 GCGGGATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTT 742347
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| ||||| || || ||||| || || || || || ||||| || |||||||||
Sbjct 742346 CGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCATG 742294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334929597687272
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |