Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3803 132 3e-26 >seq3803 Length=782546 Score = 132 bits (146), Expect = 3e-26 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||||||| | || || | |||||||||| ||| || || || ||||| | Sbjct 742753 CATT-CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGT 742695 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| ||| | || || | ||||||||| || ||||| || | |||||| || | Sbjct 742694 CGCTCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAG 742635 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| |||||||||||| ||| ||| |||||||||| | || || | || Sbjct 742634 GGGGGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTT 742575 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || | ||||| ||||| |||||||| || || ||||| |||||||| Sbjct 742574 CGACCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 129 bits (142), Expect = 4e-25 Identities = 169/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||||||| | || || | |||||||| |||||| || || ||||| | Sbjct 742525 CATT-CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGT 742467 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| ||| | || || | ||||||||||| || || || || ||||| || | Sbjct 742466 CGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTG 742407 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||||||||||||| |||||| ||||||||| | | |||||| | || Sbjct 742406 GCGGGATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTT 742347 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | ||||| || || ||||| || || || || || ||||| || ||||||||| Sbjct 742346 CGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCATG 742294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334929597687272