Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3803 125 6e-24 seq4114 105 6e-18 >seq3803 Length=782546 Score = 125 bits (138), Expect = 6e-24 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||||||||| || ||| |||| || | || || || | Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 25058 TGACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || ||| || || |||| | ||| ||||||||||| || || ||||||| Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCA-AGACAAAGAAGGCATCCCCCCTGACC 742640 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || |||||| | ||||||| || ||| || |||| |||| Sbjct 742641 AACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACA 742700 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 | || || ||||| ||||| || ||| | || || || | |||||||||| Sbjct 742701 ACATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGGAA 742751 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||| || || || | ||||| | ||||| || | Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || ||||| | |||| ||| ||||||||||| || || || ||||| Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAAATTCAG-GACAAAGAAGGCATCCCGCCAGACCA 742413 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || ||||| ||||| | ||||||| || ||| || |||| ||||| Sbjct 742414 ACAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAA 742473 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || || || || || || | || || ||| | |||||||||| Sbjct 742474 CATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAGGTTGAGAGGAGGAA 742523 >seq4114 Length=678496 Score = 105 bits (116), Expect = 6e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| || ||||| ||||||||||| | |||||||| || |||||| | ||||||| || Sbjct 195579 AGGTATCCCACCAGACCAACAGCGTCTCATTTTTGCTGGAAAACAACTTGAAGATGGACG 195520 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || || | ||||| || ||||| ||||||||||| |||||| | ||||| || || || Sbjct 195519 AACACTGAGTGATTATAACATTCAGAAAGAATCCACTCTACATCTTGTGCTCAGACTTAG 195460 Query 25220 AGGAGG 25225 ||| || Sbjct 195459 AGGKGG 195454 Score = 105 bits (116), Expect = 6e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| || ||||| ||||||||||| | |||||||| || |||||| | ||||||| || Sbjct 197826 AGGTATCCCACCAGACCAACAGCGTCTCATTTTTGCTGGAAAACAACTTGAAGATGGACG 197767 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 || || | ||||| || ||||| ||||||||||| |||||| | ||||| || || || Sbjct 197766 AACACTGAGTGATTATAACATTCAGAAAGAATCCACTCTACATCTTGTGCTCAGACTTAG 197707 Query 25220 AGG 25222 ||| Sbjct 197706 AGG 197704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433305227530280