Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3597 239 5e-58 seq1713 239 5e-58 seq628 96.9 4e-15 >seq3597 Length=814645 Score = 239 bits (264), Expect = 5e-58 Identities = 517/762 (68%), Gaps = 14/762 (2%) Strand=Plus/Plus Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 ||||| |||| |||||||| ||||| ||| ||| | | || |||||||| || ||| Sbjct 810123 AATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCAAGGAGA 810182 Query 92981 CGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 | ||| || || || || ||| |||| || || || || ||| ||||| | || Sbjct 810183 TG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACAAATAAT 810241 Query 93040 TTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 || | || | | || | | ||||| | | | | | | |||| ||||| |||| Sbjct 810242 CTCCCTAACCCGTGCT-TCAGTKGGTTTRTTGATAAGTTTAGAGAACATCAAGCATGCAA 810300 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTAAACCTGGT 93157 | || || | |||||| |||| || | || | ||||| | |||||| |||||| Sbjct 810301 AATCACAGTGAAGACCTTCATCTC-TGCTGATTAGTTCATTAGAGTGTGTTAATCCTGGT 810359 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 || | || || || || | ||| ||||||| |||||| ||||||||| || || || Sbjct 810360 AATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAGAAAATCCCC 810419 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT--ACTGCTGATCC 93275 || || || |||||||| || || | ||| |||| || | || ||| | |||| Sbjct 810420 TCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACT--TAATCC 810477 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 | || | || ||| | || ||||| ||| |||||| | || || ||||| ||||||| Sbjct 810478 ACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGCATTAAATA 810537 Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 | || || ||| ||| ||||| ||||| || || ||| |||||||| | Sbjct 810538 ACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACATTTCGG 810597 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455 | |||| ||||||||||| | ||| || || || |||||||| ||||| | || | Sbjct 810598 AGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTACTTGTA 810657 Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515 ||||||| | ||||| || || |||||||| || || |||||| |||||||||| Sbjct 810658 CTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCTGCAAAAA 810717 Query 93516 aaGCCAATATATGCTTTATAAAA--TGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 | || | | | || | |||| ||||||| || | | || ||| || Sbjct 810718 AGGCTAGCACTT--TTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACTCCAGTCATT 810775 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 | |||||| || || ||||||||||| ||||||| || ||| |||||| ||||| Sbjct 810776 GATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTTTCTTGTA 810835 Query 93634 CATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | || ||||| |||| ||| ||||||||||||| ||||| Sbjct 810836 GAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAA 810877 >seq1713 Length=288524 Score = 239 bits (264), Expect = 5e-58 Identities = 516/762 (68%), Gaps = 14/762 (2%) Strand=Plus/Minus Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 ||||| |||| |||||||| ||||| ||| ||| | | || |||||||| || ||| Sbjct 285798 AATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCAAGGAGA 285739 Query 92981 CGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 | ||| || || || || ||| |||| || || || || ||| ||||| | || Sbjct 285738 TG-ACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTTCACAAATAAT 285680 Query 93040 TTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 || | || | | || | | ||||| | | | | | | |||| ||||| |||| Sbjct 285679 CTCCCTAACCCGTGCT-TCAGTKGGTTTRTTGATAAGTTTAGAGAACATCAAGCATGCAA 285621 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTAAACCTGGT 93157 | || || | |||||| |||| || | || | ||||| | |||||| |||||| Sbjct 285620 AATCACAGTGAAGACCTTCRTCTC-TGCTGATTAGTTCATTAGAGTGTGTTAATCCTGGT 285562 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 || | || || || || | ||| ||||||| ||||| ||||||||| || || || Sbjct 285561 AATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAGAAAATCCCC 285502 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT--ACTGCTGATCC 93275 || || || |||||||| || || | ||| |||| || | || ||| | |||| Sbjct 285501 TCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACT--TAATCC 285444 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 | || | || ||| | || ||||| ||| |||||| | || || ||||| ||||||| Sbjct 285443 ACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGCATTAAATA 285384 Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 | || || ||| ||| ||||| ||||| || || ||| |||||||| | Sbjct 285383 ACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACATTTCGG 285324 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455 | |||| ||||||||||| | ||| || || || |||||||| ||||| | || | Sbjct 285323 AGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTACTTGTA 285264 Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515 ||||||| | ||||| || || |||||||| || || |||||| |||||||||| Sbjct 285263 CTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCTGCAAAAA 285204 Query 93516 aaGCCAATATATGCTTTATAAAA--TGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 | || | | | || | |||| ||||||| || | | || ||| || Sbjct 285203 AGGCTAGCACTT--TTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACTCCAGTCATT 285146 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 | |||||| || || ||||||||||| ||||||| || ||| |||||| ||||| Sbjct 285145 GATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTTTCTTGTA 285086 Query 93634 CATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | || ||||| |||| ||| ||||||||||||| ||||| Sbjct 285085 GAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAA 285044 >seq628 Length=1115932 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 93406 CTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGA 93465 ||| || ||||| ||||| || |||||||| || ||||| | ||| || ||||||||| Sbjct 724697 CTCGATAGCAATCTGGAAACCATAGAAACACCTTGCTTCAGGGATTTGAACTTCTTGACT 724756 Query 93466 AAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATAT 93525 ||| | ||| || || ||||||||||| |||||||| ||| || || || || || | Sbjct 724757 AAAGCACTCAACAAGGTTTTCATTGACAATACCATCACTTGCAGCGAAGAAGGCTAAGAC 724816 Query 93526 ATGCTTTATAAAATGTTTCTCATCATC 93552 ||| ||||| || |||||||| Sbjct 724817 ATGYGAGATAAAGTGGCGTTCATCATC 724843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556830785202880