Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3803 170 4e-37 seq1363 122 2e-22 seq2006 84.2 4e-11 >seq3803 Length=782546 Score = 170 bits (188), Expect = 4e-37 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | | | || ||| | || || ||||||||||| |||||||| || ||| Sbjct 742751 TTCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGC 742692 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || | |||||||| | || || || || |||||||| ||||||||||| || | Sbjct 742691 TCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGG 742632 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | |||||||| |||||||||||||||| || || ||| |||||||| || ||| | Sbjct 742631 GGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGA 742572 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | ||| |||||||||||||| | ||||||||||| ||||||||| Sbjct 742571 CCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 >seq1363 Length=349685 Score = 122 bits (134), Expect = 2e-22 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 68268 GACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCG 68327 ||||||| || |||||||| || ||| || || |||||||| | | |||||| | | Sbjct 271539 GACTCTTCTTCAATGTTATAGTCACTGAGAGTTCTACCATCTTCAAGTTTCTTCCCTGTG 271598 Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || || || || || || ||||| |||||||| ||||||||||||||| ||| | Sbjct 271599 AAAATAAGAAGCTGCTGATCTGGTGGGATGCCTTCTCTGTCTTGAATCTTTGACTTAATA 271658 Query 68388 GCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446 | || || |||| |||||| ||| || || | ||||||| | ||||| || | |||||| Sbjct 271659 TCTTCAATTGTGT-TGCTGAGTTCAACGTCAAGGGTGATGATCTTTCCTGTCATGGTCTT 271717 Query 68447 GACGAATATCTGCATT 68462 || || ||||||||| Sbjct 271718 AACAAAGATCTGCATT 271733 >seq2006 Length=936319 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 ||||||||||| |||||||| | |||||| ||| || || || ||| | |||||||| Sbjct 303780 CCTTCCTTGTCCTGAATCTTGGTCTTGACATTCTCAATAGTATC-GCTAGGCTCTACTTC 303722 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || ||||| | ||| || ||||| |||||||| Sbjct 303721 AAGGGTGATGGTCTTACCCGTTAYGGTTTTAACGAAGATCTGCAT 303677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921572724552640