Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3803 158 1e-33 seq4114 98.7 8e-16 seq1363 89.7 4e-13 >seq3803 Length=782546 Score = 158 bits (174), Expect = 1e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||| || | ||| | || || ||||| || |||||||| ||||||| |||||| Sbjct 742738 TCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCC 742679 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||||||||||||| ||||| | ||||| | |||||||| || || ||||||||||| Sbjct 742678 ATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTT 742619 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||||| ||| | | |||| ||||||| | | |||||| || | ||| | Sbjct 742618 GTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAAT 742559 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| ||| || || ||||||||||| Sbjct 742558 GGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 145 bits (160), Expect = 6e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||||||| |||||| ||||||||| ||||| || Sbjct 742491 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCG 742432 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGT-TT 114304 ||| ||||||||||||||||||| || || |||||||||||||| ||| ||| || || Sbjct 742431 GCGAAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTGTCCTGAAT-TTTCGTCTT 742373 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | ||||| || ||| | | |||||| |||| || | || || || || | ||| Sbjct 742372 CACATTTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGT 742313 Query 114365 TTTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 742312 CTTCACAAAGATCTGCATG 742294 >seq4114 Length=678496 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| | || | ||||| || |||||||| |||||||| ||||| |||| || || Sbjct 195463 AGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGTTCGT 195522 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 ||||||||||||||| ||||| | ||||||||||||||||| || || || ||| Sbjct 195523 CCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATACCT 195579 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| | || | ||||| || |||||||| |||||||| ||||| |||| || || Sbjct 197710 AGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGTTCGT 197769 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 ||||||||||||||| ||||| | ||||||||||||||||| || || || ||| Sbjct 197770 CCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATACCT 197826 >seq1363 Length=349685 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 114189 GATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCG 114248 || |||| || |||||| || || || | ||| | | ||||||||||| || || | | Sbjct 271539 GACTCTTCTTCAATGTTATAGTCACTGAGAGTTCTACCATCTTCAAGTTTCTTCCCTGTG 271598 Query 114249 TAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC 114308 | || ||| |||| || || || || ||||||||| |||| ||||||| || | Sbjct 271599 AAAATAAGAAGCTGCTGATCTGGTGGGATGCCTTCTCTGTCTTGAATCTTTGACTTAATA 271658 Query 114309 TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTT 114368 | ||||| |||| | || ||| ||||| | ||| | | || || |||| || || Sbjct 271659 TCTTCAATTGTGTTGCTGAGTTCAACGTCAAGGGTGATGATCTTTCCTGTCATGGTCTTA 271718 Query 114369 ACAAAAATCTGCAT 114382 ||||| |||||||| Sbjct 271719 ACAAAGATCTGCAT 271732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420112320886944