Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3803 145 2e-29 >seq3803 Length=782546 Score = 145 bits (160), Expect = 2e-29 Identities = 176/237 (74%), Gaps = 7/237 (3%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || ||||| || |||| || || || ||||| || |||||| | || || || Sbjct 742509 CTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA 742450 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCT 288375 ||||| | |||||||| |||||||| ||||||||||| ||| ||||| |||||| Sbjct 742449 TCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTG---GTCTGGCGGGATGCCTTCT 742393 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || ||||| ||||||| ||||| ||||| |||| |||||| | ||| ||||| | ||| Sbjct 742392 TTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTG 742333 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAATATTTT 288492 || ||||| || || | |||||| || || |||||||| | ||| || ||| | ||| Sbjct 742332 ATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCATGACGTT-TTTTAAGAGTTT 742277 Score = 127 bits (140), Expect = 5e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| ||||| ||||||| ||| ||||| ||||| || |||||| | || || || Sbjct 742738 TCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCC 742679 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||||| | ||||||||| || || || || | ||||| | ||||| |||||||| Sbjct 742678 ATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTT 742619 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 || || || || | |||||| || || || | ||||| | ||| || || || || || Sbjct 742618 GTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAAT 742559 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || |||| |||||||||||| ||||||||| Sbjct 742558 GGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179589227043536