Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4158 105 7e-18 seq3929 104 3e-17 seq998 104 3e-17 seq322 104 3e-17 seq1736 100 3e-16 seq1339 100 3e-16 seq3803 86.0 7e-12 >seq4158 Length=648639 Score = 105 bits (116), Expect = 7e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||||| Sbjct 107081 AAATCCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTC 107140 Query 57060 ACCACTATACTACCGAGGATT 57080 ||||||||||||||||||||| Sbjct 107141 ACCACTATACTACCGAGGATT 107161 >seq3929 Length=72668 Score = 104 bits (114), Expect = 3e-17 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 56998 AAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 14592 AAAAATCATCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 14651 Query 57056 ACTCACCACTATACTACCGAGGATTG 57081 ||||||||||||||||||||||| || Sbjct 14652 ACTCACCACTATACTACCGAGGAATG 14677 >seq998 Length=2343502 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||| ||||| |||||||||||| Sbjct 1204373 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACGGGCGGGGATACTCACCACT 1204314 Query 57066 ATACTACCGAGGATTGAATATA 57087 |||||||||||||||| |||| Sbjct 1204313 ATACTACCGAGGATTGCTTATA 1204292 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| |||| | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1206362 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1206421 Query 57065 TATACTACCGAGGA 57078 |||||||||||||| Sbjct 1206422 TATACTACCGAGGA 1206435 Score = 102 bits (112), Expect = 9e-17 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1208009 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1208068 Query 57066 ATACTACCGAGG-ATTGAATATA 57087 |||||||||||| ||| ||||| Sbjct 1208069 ATACTACCGAGGAATTACATATA 1208091 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1192772 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1192831 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 1192832 ATACTACCGAGGA 1192844 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1210995 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1210936 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 1210935 ATACTACCGAGGA 1210923 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1214661 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1214602 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 1214601 ATACTACCGAGGA 1214589 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||| ||||| | ||||||||||||||||||| |||||||||||| Sbjct 1203874 TCTCCCCGGCGGGGAATCAAACCCCGTTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1203815 Query 57066 ATACTACCGAGGATTGAATATA 57087 |||||||||||||||| |||| Sbjct 1203814 ATACTACCGAGGATTGCTTATA 1203793 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| | || | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1210830 CTCCCCTGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1210771 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 1210770 TACTACCGAGGA 1210759 Score = 86.0 bits (94), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1205590 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTACCGAGGA 1205644 >seq322 Length=1176554 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 797164 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 797223 Query 57066 ATACTACCGAGGATT 57080 ||||||||||||||| Sbjct 797224 ATACTACCGAGGATT 797238 >seq1736 Length=965595 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 494508 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 494449 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 494448 ATACTACCGAGGA 494436 >seq1339 Length=3011 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 168 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 227 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 228 ATACTACCGAGGA 240 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2503 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 2444 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 2443 ATACTACCGAGGA 2431 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||| ||||||||| |||||||||||| Sbjct 2852 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGYGACAGGCGGGGATACTCACCACT 2793 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 2792 ATACTACCGAGGA 2780 >seq3803 Length=782546 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | || || | ||| | ||| ||| || || || ||||| || | Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | ||| || | || || || || || ||||| |||||||| | || ||||| | || Sbjct 742689 AAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGG 742630 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT-CGCCACCGTGTCGCTCGATTCCAC 42160 | || || ||||| ||| | ||||||| | | | | | |||||||| | ||| || Sbjct 742629 ATGCCTTCTTTGTCT-TGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGAC 742571 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || |||||||| ||||| | ||||| || || || |||||| Sbjct 742570 CTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543183520830080