Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3803 98.7 1e-15 seq25 82.4 8e-11 >seq3803 Length=782546 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||| || || || || |||| || || || || || |||||||| || Sbjct 742521 CCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 742462 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||||||||| || ||||| | ||||| ||||| ||||| || || Sbjct 742461 AAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGG 742402 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| || || ||||| ||| ||| || | ||||| | | || ||| Sbjct 742401 ATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGACT 742342 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||| || || ||||| || || || || ||||| Sbjct 742341 TCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 >seq25 Length=601041 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 153795 GCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATG 153854 || ||||| |||||||| ||||| || || || ||| | ||||| | || || |||||| Sbjct 254148 GCAATAAAGACGTTAAATGACTGACTTTGGTCAATGTAGGCGCCCCTGTCAGCTGCCATG 254089 Query 153855 TCAATCAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCG 153914 ||||||||| || ||| || |||||||| || || || | | ||| || |||||| Sbjct 254088 TCAATCAAGACCTTCTGGCTGATCTCCCACACTGTCTTATACAAAGGTTTGATTTCGTCG 254029 Query 153915 GGTAT 153919 || || Sbjct 254028 GGAAT 254024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499617869145280