Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3803 116 4e-21 >seq3803 Length=782546 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| |||||| || || || ||||| |||| Sbjct 742488 GACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCG 742429 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTTAA 138539 |||| |||||||||||||| || || || ||||||||||| ||| |||| || || | Sbjct 742428 AAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTGTC-CTGAATTTTCGTCTTCAC 742370 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || ||| | | || || || | || | || || ||||| | ||| || Sbjct 742369 ATTTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTT 742310 Query 138600 TACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 742309 CACAAAGATCTGCATG 742294 Score = 113 bits (124), Expect = 4e-20 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || | ||| | | ||||| || || ||||||||||||||| Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || |||||||| || | | || || | |||||||| || || Sbjct 742689 AAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGG 742630 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | |||||||| | | || | ||||||| | | || || Sbjct 742629 ATGCCTTCTTTGTCT-TGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGAC 742571 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| || |||| ||| || || ||||||||||| Sbjct 742570 CTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496235651456640