Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3803 109 5e-19 >seq3803 Length=782546 Score = 109 bits (120), Expect = 5e-19 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | ||||| |||||||| ||| | || ||||| | | Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | | | | | ||| ||| || | |||||||| || || ||| | ||||| Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | ||||| | || || ||||| || || || | || || | | ||||||||| Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAA 742701 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || | || || ||| | || ||| | |||||||| || Sbjct 742702 CATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGG 742749 Score = 104 bits (114), Expect = 2e-17 Identities = 176/248 (71%), Gaps = 9/248 (4%) Strand=Plus/Plus Query 38229 AAACTCTTTaaaaaa---aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACC 38285 |||||||| ||||| ||||| || || || || || | || || || || ||||| Sbjct 742277 AAACTCTTAAAAAACGTCATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACT 742336 Query 38286 GTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGAA-AAAATCCTCGACAAAG 38343 | || ||||| | | ||| | | | ||| | | |||| ||||| | ||||||| Sbjct 742337 TTGGAAGTCGAACCAAGCGATACTATTGAAAATG--TGAAGACGAAAATTCAGGACAAAG 742394 Query 38344 AGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 | || || |||||| ||||||||||| ||||| | ||| || |||||||| || || | Sbjct 742395 AAGGCAT-CCCGCCAGACCAACAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGC 742453 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 || || | | ||||||||||||||| ||||| | || || || | || ||| | ||| Sbjct 742454 CGTACTTTGAGCGACTACAACATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAGGTTG 742513 Query 38463 AGAGGCGG 38470 ||||| || Sbjct 742514 AGAGGAGG 742521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500145840686080