Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 1e-15 >seq25 Length=601041 Score = 98.7 bits (108), Expect = 1e-15 Identities = 184/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| | ||| | ||| | ||||| | ||||||||||| |||||||||||| ||| Sbjct 247039 CCACAGCATATGCTGATGAGAGTCGCTGTTGGTATCCATGGTGAAGATATTGATGCTGCC 247098 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTAT-GTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| | | | | | | || ||||| || ||| ||||||| || || Sbjct 247099 ATTGAGACATACAATCTTTTAT-CTGAGAAATGGTTCACTCATGCATCACCAACACTGTT 247157 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG---GA 111787 || |||||||| ||||| || ||||| || ||||| ||| ||| | || | || Sbjct 247158 TAATGCTGGTACTTGCAGACCACAGATGTCTAGCTGTTT-CTTGTTG--ACCATGTCTGA 247214 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || || | ||||| || | ||||||| |||||| | ||||||||| || Sbjct 247215 TGACAGCATTGAAGGCATCTATGAGACTCTCAAGACATGTGCACTGATCTCAAAGAATGC 247274 Query 111848 TGGTGGTATCGGGATGCACATCCAT 111872 |||||| || ||| | |||| ||| Sbjct 247275 TGGTGGAATTGGGCTCAACATTCAT 247299 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 |||||| | ||||| ||| | | || ||||||||||| || || || |||||||| | Sbjct 253160 GGTCTTAGGAACAGCCTTCTTCTTGCTCCAATGCCAACTGCTTCAACAGCACAAATTCTT 253219 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGC 113005 ||||||||||||| | ||||||| ||||| | |||||||| ||| |||||| || | Sbjct 253220 GGTAATAATGAATCCATTGAACCTTACACCAGCAACATCTACTCT-AGAAGAGTTCTGTC 253278 Query 113006 GGGAGAGTTT 113015 ||||||||| Sbjct 253279 TGGAGAGTTT 253288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620708941984640