Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 4e-15 >seq25 Length=601041 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATT 105965 ||||||||| | || |||||| ||| |||||||| | ||||| ||||||| | ||| Sbjct 253288 AAACTCTCCAGACAGAACTCTTCT-AGAGTAGATGTTGCTGGTGTAAGGTTCAATGGATT 253230 Query 105966 CATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGT 106025 |||||||||| | |||||||| || || || ||||||||||| || | | ||| |||| Sbjct 253229 CATTATTACCAAGAATTTGTGCTGTTGAAGCAGTTGGCATTGGAGCAAGAAGAAGGCTGT 253170 Query 106026 TACGAAGACC 106035 | | |||||| Sbjct 253169 TCCTAAGACC 253160 Score = 89.7 bits (98), Expect = 6e-13 Identities = 173/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 ||| |||| | |||||| || ||||| ||||||||| | ||||| | | ||||| Sbjct 247299 ATGAATGTTGAGCCCAATTCCACCAGCATTCTTTGAGATCAGTGCACATGTCTTGAGAGT 247240 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 ||||||| || | || ||| || ||| | | ||| || || |||||||| Sbjct 247239 CTCATAGATGCCTTCAATGCTGTCATCAGACATGGTCAACAAGAAACAGCTAGACATCTG 247180 Query 107170 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGG 107228 ||||| ||||||||||| || || ||||||| ||| ||| |||| ||| | | | Sbjct 247179 TGGTCTGCAAGTACCAGCATTAAACAGTGTTGGTGATGCATGAGTGAACCATTTC-TCAG 247121 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCA 107288 | | | ||||||||| | | ||| |||||| ||||| || ||||| || | || | Sbjct 247120 ATAAAAGATTGTATGTCTCAATGGCAGCATCAATATCTTCACCATGGATACCAACAGCGA 247061 Query 107289 CACGCATAAACAT 107301 | | ||| | ||| Sbjct 247060 CTCTCATCAGCAT 247048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589949000034880