Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3803 172 1e-37 seq1363 111 3e-19 seq4114 84.2 5e-11 >seq3803 Length=782546 Score = 172 bits (190), Expect = 1e-37 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| ||||| ||||||||||||||||| || || ||||| ||| | ||| Sbjct 742744 TCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGT 742685 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || || || || || || || || | ||||||||| || || ||||| Sbjct 742684 ACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCC 742625 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| ||| || || |||||||||||||| ||| || ||||| Sbjct 742624 TTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAG 742565 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || ||||| |||||||| || ||||| | |||||| Sbjct 742564 GGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 |||| |||||||||||||| ||||| || || || ||||| ||| | ||| | ||| Sbjct 742509 CTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA 742450 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| ||||| || || |||||||| || || ||||||||||| || |||||||||||| Sbjct 742449 TCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTG 742390 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || |||||||| ||| || || ||||| || || ||| ||||| | || | Sbjct 742389 TCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTGATA 742330 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || ||||| || || || | ||||| Sbjct 742329 GTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Score = 93.3 bits (102), Expect = 9e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || ||||| || ||||||||||||||||| || ||| ||| || |||||| Sbjct 742878 AGACGCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTTTGTCTTTACATTCTCA 742819 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 ||||| || ||| ||||||||||| | || |||||||| | ||||| ||||| Sbjct 742818 ATGGTATCGCTTGGTTCGACTTCAAGGGTGATTGTTTTTCCTGTTAGTGTTTTGACGAAG 742759 Query 195133 ACTTGCATT 195141 | |||||| Sbjct 742758 ATCTGCATT 742750 >seq1363 Length=349685 Score = 111 bits (122), Expect = 3e-19 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 194947 GACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCG 195006 ||||||| || ||| || || || |||||||| |||||||| || | ||| |||| | Sbjct 271539 GACTCTTCTTCAATGTTATAGTCACTGAGAGTTCTACCATCTTCAAGTTTCTTCCCTGTG 271598 Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066 || ||||| | || || ||||| || ||||||||| |||||||||| ||| ||| | Sbjct 271599 AAAATAAGAAGCTGCTGATCTGGTGGGATGCCTTCTCTGTCTTGAATCTTTGACTTAATA 271658 Query 195067 TTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTT 195124 | ||||| |||| | || ||| || |||||||| | |||||||||||| || | Sbjct 271659 TCTTCAATTGTGTTGCTGAG--TTCAACGTCAAGGGTGATGATCTTTCCTGTCATGGTCT 271716 Query 195125 TTACGAACACTTGCATT 195141 | || || | |||||| Sbjct 271717 TAACAAAGATCTGCATT 271733 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| || ||||| ||||| || ||| || ||||| || || || |||||||| || Sbjct 271967 TCTTAACACAAGATGAAGTGTTGACATCTTCTGAATGTTATACTCACTGAGAGTTCTGCC 272026 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| |||||||| ||| | || | ||| || || || ||||| |||| |||||||| Sbjct 272027 ATCTTCAAGCTGCTTCCCTTCAAATAAAAGACGCTGCTGATCTGGTGGAACACCTTCTTT 272086 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || ||| | || ||| || ||||||||||| || Sbjct 272087 GTTTTGGACCATTGTCTTAACATTCTCAATGGTTTC 272122 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || |||| ||||| || |||||||||| ||| | || || ||| | Sbjct 271742 TCTCAATCTTAACGCAAGTTGAAGTGTTGACTCTTTTTCAATGCTATAGTCACTGAGACT 271801 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | | |||||||| |||||||| ||| || ||||| || || |||||||| | |||||| Sbjct 271802 TTTGCCATCTTCAAGCTGCTTCCCTTGAAATATAAGACGCTGCTGGTCTGGTGCAATGCC 271861 Query 195039 TTCTTTGTCTTGAAT 195053 ||||| | | ||||| Sbjct 271862 TTCTTCGACATGAAT 271876 >seq4114 Length=678496 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||||| || |||||||| ||||| ||||| || ||||| || || Sbjct 195459 TCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGT 195518 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || |||||||| || || || || || || || || || ||||||||||| || || || Sbjct 195519 TCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATACC 195578 Query 195039 T 195039 | Sbjct 195579 T 195579 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||||| || |||||||| ||||| ||||| || ||||| || || Sbjct 197706 TCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGT 197765 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || |||||||| || || || || || || || || || ||||||||||| || || || Sbjct 197766 TCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATACC 197825 Query 195039 T 195039 | Sbjct 197826 T 197826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109420303915304