Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1713 338 7e-88 seq3597 331 1e-85 seq25 138 1e-27 seq628 109 6e-19 >seq1713 Length=288524 Score = 338 bits (374), Expect = 7e-88 Identities = 615/894 (69%), Gaps = 17/894 (2%) Strand=Plus/Minus Query 18665 CCATTTTT-TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGAT 18723 |||||||| ||||| || || |||| || |||||||| |||| ||||| || | ||| Sbjct 285924 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 285865 Query 18724 ATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCT 18783 || ||||||||| |||||| ||| | | || | ||| | || || | | Sbjct 285864 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCA 285805 Query 18784 AATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCT 18843 | || | ||| || | ||||||| ||| ||| ||| | | || |||||||| Sbjct 285804 ACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCA 285745 Query 18844 ATTAATTTAACAGGTAGTGCATCTGTA-AGAAATTCTTGTTCTATATTTACTGCCTCTGA 18902 | | | | || || ||||| || |||| | ||| ||| || || || || || | Sbjct 285744 AGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAATGTTAACAGCTTCACA 285686 Query 18903 TATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTA---AACATCAA 18959 ||||| ||| | ||||| | || | | ||| |||| |||||||| Sbjct 285685 AATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAAG---TTTAGAGAACATCAA 285629 Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 |||||||||||||| || || || || ||||| || || | ||||||||| |||||| Sbjct 285628 GCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTTAA 285569 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 || || | | || | ||||| ||||||||||| | ||||||| ||||||||||| Sbjct 285568 TCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAGAA 285509 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 || || || ||||| ||||| || || | |||||||||| | |||| || | Sbjct 285508 AATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTT 285449 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 |||||| || | | ||| ||||||| || | ||||| || | || || |||| ||| Sbjct 285448 AATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGCATT 285389 Query 19200 AAATAGATACATACGC---TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTA 19256 ||||| || || | || || |||| || | || | ||| ||||| | |||||| Sbjct 285388 AAATA---ACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTA 285332 Query 19257 CATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGT 19316 |||||| || || ||||| || || | || ||||| || |||||||||||||||||| Sbjct 285331 CATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTG 285272 Query 19317 TATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGC 19376 || |||||||| || |||||||| || | |||||| || |||||||| || || Sbjct 285271 TACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGC 285212 Query 19377 TGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTG-AGGTTAATGTATTCC 19435 ||||||||| |||| || | | | ||| ||| ||| ||| || || ||| ||| Sbjct 285211 TGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCA-CTGTCCGTCAAAGTACTCC 285153 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | ||||| ||||||||| || || |||||||| |||||||||| ||||| ||||| Sbjct 285152 AGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTT 285093 Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTAT 19549 | || || | | ||||| || ||| || || ||||||| ||||| |||| Sbjct 285092 TCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCTAT 285039 >seq3597 Length=814645 Score = 331 bits (366), Expect = 1e-85 Identities = 649/950 (68%), Gaps = 21/950 (2%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAA-GAATTCTCTTCATTAGAATT---CATTACTCCCA 18667 |||||| | ||| ||||| |||| ||| ||||| ||| || ||| || || Sbjct 809942 TTAAAACTGCTCATTCAAAGTAAAATGAAATCTCT-CATGTTTCTTGCACATGACACCAT 810000 Query 18668 TTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATAC 18727 |||| ||||| || || |||| || |||||||| |||| ||||| || | ||| || Sbjct 810001 TTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAAATGT 810060 Query 18728 ATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATA 18787 ||||||||| |||||| ||| | | || | ||| | || || | | | | Sbjct 810061 TTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCAAGGGCAACAA 810120 Query 18788 GTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTA 18847 | | ||| || | ||||||| ||| ||| ||| | | || |||||||| | | Sbjct 810121 GCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCATTCCAAGGA 810180 Query 18848 ATTTAACAGGTAGTGCATCTGTA-AGAAATTCTTGTTCTATATTTACTGCCTCTGATATA 18906 | | || || ||||| || |||| | ||| ||| || || || || || | ||| Sbjct 810181 GATGACATGGAAGGGCATCAGTCCAGAACTCCTT-TTCAATGTTAACAGCTTCACAAATA 810239 Query 18907 ATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTA---AACATCAAACAT 18963 || ||| | ||||| | || | | ||| |||| |||||||| ||| Sbjct 810240 ATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAAG---TTTAGAGAACATCAAGCAT 810296 Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023 ||||||||||| || || || || ||||| || || | ||||||||| |||||| || Sbjct 810297 GCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTTAATCCT 810356 Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATA 19083 || | | || | ||||| ||||||||||| | ||||| | ||||||||||| || Sbjct 810357 GGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAGAAAATC 810416 Query 19084 CCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATC 19143 || || ||||| ||||| || || | |||||||||| | |||| || | |||| Sbjct 810417 CCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGACTTAATC 810476 Query 19144 CATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAAT 19203 || || | | ||| ||||||| || | ||||| || | || || |||| ||||||| Sbjct 810477 CACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGCATTAAAT 810536 Query 19204 AGATACATACGC---TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 | || || | || || |||| || | || | ||| ||||| | |||||||||| Sbjct 810537 A---ACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTACATT 810593 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || || ||||| || || | || ||||| || |||||||||||||||||| || Sbjct 810594 TCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTGTACT 810653 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 |||||||| || |||||||| || | |||||| || |||||||| || |||||| Sbjct 810654 TGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGCTGCA 810713 Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTG-AGGTTAATGTATTCCAATC 19439 ||||| |||| || | | | ||| ||| ||| ||| || || ||| |||| || Sbjct 810714 AAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCA-CTGTCCGTCAAAGTACTCCAGTC 810772 Query 19440 ATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTT 19499 ||| ||||||||| || || |||||||| |||||||||| ||||| |||||| || Sbjct 810773 ATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGTGCTTTCTT 810832 Query 19500 ATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTAT 19549 || | | ||||| || ||| || || ||||||| ||||| |||| Sbjct 810833 GTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCTAT 810882 >seq25 Length=601041 Score = 138 bits (152), Expect = 1e-27 Identities = 217/311 (70%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542 || || ||||| || | || || || || ||||| || || || ||||| || ||| Sbjct 247286 CCAATTCCACCAGCATTCTTTGAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCT 247227 Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTT 48602 || || || ||||| ||| | || | ||||| |||||||| || || ||||| Sbjct 247226 TCAATGCTGTCATCAGACATGGTCAACAAGAAACAGCTAGACATCTGTGGTCTGCAAGTA 247167 Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662 || | |||||| | |||||| ||||||||| | ||||||||||| ||||| | || ||| Sbjct 247166 CCAGCATTAAACAGTGTTGGTGATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTAT 247107 Query 48663 GTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATA 48722 || ||||| ||| ||| ||||| ||| ||||| | || || | ||| | |||| Sbjct 247106 GTCTCAATGGCAGCATCAATATCTTCACCATGGATACCAACAGCGACTCTCATCAGCATA 247047 Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782 | || || | |||| ||| |||| ||| || || | || |||||| | |||||| Sbjct 247046 TGCTGTGGACGTTCAGCAACTTTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTC 246987 Query 48783 TTAAAACCAAA 48793 | ||| |||| Sbjct 246986 TGGAAAACAAA 246976 Score = 120 bits (132), Expect = 3e-22 Identities = 145/196 (74%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 48262 GTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||| || || || | ||| | ||||| |||||||| ||||| |||||||||||||| | Sbjct 247825 GTTCCTCTTTCCCTGTGTTCTTCTTAAGGTCAAGAAACTCCATGATATCAGCATGCCAAG 247766 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 |||||| || || || | ||||||||| || || || ||||| || | |||||| | Sbjct 247765 GTTCTAGGTAGATAGCAAAAGCACCTGGTCTCTTGTTTCCACCTTGGTCAACATATCTTG 247706 Query 48382 CAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCG 48441 |||| ||| ||| || || || | ||||| || ||||| || | ||||||| || Sbjct 247705 CAGTGCTGTCATAGACCCTCAAAAGAGGGACTATTCCATTRGACACTCCATTGG-TCTAA 247647 Query 48442 AAATATAACTTCCACT 48457 ||| ||||| ||||| Sbjct 247646 AAACATAACAACCACT 247631 >seq628 Length=1115932 Score = 109 bits (120), Expect = 6e-19 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 18792 TCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTT 18851 |||||| || ||||| | ||| ||| ||||||| ||||| |||||||| || ||||| Sbjct 723825 TCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAATTT 723884 Query 18852 AACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGA 18911 | ||||| ||||| || || || |||||||| ||| || || ||| ||||| Sbjct 723885 ACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAATCTG 723944 Query 18912 TACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATC 18971 | ||| | || || || || || || |||| | |||||||||||||||| || Sbjct 723945 TTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGCAAAGTC 724004 Query 18972 ACAATGTAGTCCCT 18985 |||||| ||||||| Sbjct 724005 ACAATGGAGTCCCT 724018 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 19036 CttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCT 19095 ||||| || | |||||| || | |||||| || || |||||||| || ||||| || || Sbjct 724372 CTTTTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCA 724431 Query 19096 GCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCC 19155 ||||| ||||| | |||||| || | || || | | | ||||||| || ||| Sbjct 724432 GCAAAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCC 724491 Query 19156 CAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGC 19215 |||| ||| ||||| |||| || | ||| | |||| ||| || | | | Sbjct 724492 CAATGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACAAGTTTTGYTTC 724551 Query 19216 TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATT 19274 | || | |||| ||| || |||||||| | ||||||||| ||||| || ||||| Sbjct 724552 TTTTCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562078502335680