Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3597 250 3e-61 seq1713 244 1e-59 seq628 84.2 3e-11 >seq3597 Length=814645 Score = 250 bits (276), Expect = 3e-61 Identities = 604/903 (67%), Gaps = 35/903 (4%) Strand=Plus/Plus Query 36880 CCATTTTT-TGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGAT 36938 |||||||| ||||| ||| | ||||| | || || || || | ||||||||| ||||| Sbjct 809997 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 810056 Query 36939 ATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACATGATAAT 36995 || ||||||||||| |||||| || ||| | || | | ||| || || Sbjct 810057 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACC----AAG 810112 Query 36996 TCCTTCA-GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTAT 37054 | || | | || || | |||||||| ||||||| || ||| || | | ||| || Sbjct 810113 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 810172 Query 37055 ACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCAT 37113 |||| || | ||||| ||||| | |||| | |||| | || | ||||| | Sbjct 810173 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTT-CAATGTTAACAGCTT 810231 Query 37114 CTTTAACTATATTAACAATAAC---TTCTTCAGTTGGGGGATATTTTAAATATTTA---A 37167 | || || | | |||| | ||||||| || | || | | |||| | Sbjct 810232 CACAAATAATCT---CCCTAACCCGTGCTTCAGTKGGT---TTRTTGATAAGTTTAGAGA 810285 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| || |||||||||||||| || | |||||||||||| || || | ||||||||| Sbjct 810286 ACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGT 810345 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 ||||||||||| | ||| || | ||||||| ||| |||||||||||||||| |||| Sbjct 810346 GTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAG 810405 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 |||||||||| || |||||||| |||||||| || | | | || || |||| | Sbjct 810406 AAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAA---TGAAGCAG 810462 Query 37348 AATCAGA---AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | || |||||| || | | ||| | |||||| ||||||| | || | Sbjct 810463 TCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTAT 810522 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || || | || |||||||| |||| | || ||||||||||| | | Sbjct 810523 CAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAA 810582 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| |||||||| ||||| ||||| || || | | ||||| ||||||||||| || | Sbjct 810583 GACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTG 810642 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| || ||| || || | | || || | | | | ||||| || || |||| Sbjct 810643 CTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCAT 810702 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA---TTTGATA 37641 | || |||||||| || || || || ||| | |||| ||||| ||| | | | Sbjct 810703 CGCTGGCTGCAAAAAAGGCTAG--CACTTTTGACAAAAACCCTTTC-TCACTGTCCGTCA 810759 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701 | | |||| ||||| |||||||| || |||||||| || || ||||||| | Sbjct 810760 AAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAG 810819 Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC 37761 | | ||| || || | ||| | || ||| || |||||||||| |||||| | Sbjct 810820 CTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACC 810879 Query 37762 TAT 37764 ||| Sbjct 810880 TAT 810882 >seq1713 Length=288524 Score = 244 bits (270), Expect = 1e-59 Identities = 602/903 (67%), Gaps = 35/903 (4%) Strand=Plus/Minus Query 36880 CCATTTTT-TGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGAT 36938 |||||||| ||||| ||| | ||||| | || || || || | ||||||||| ||||| Sbjct 285924 CCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGTGAA 285865 Query 36939 ATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACATGATAAT 36995 || ||||||||||| |||||| || ||| | || | | ||| || || Sbjct 285864 ATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACC----AAG 285809 Query 36996 TCCTTCA-GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTAT 37054 | || | | || || | |||||||| ||||||| || ||| || | | ||| || Sbjct 285808 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 285749 Query 37055 ACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCAT 37113 |||| || | ||||| ||||| | |||| | |||| | || | ||||| | Sbjct 285748 TCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTT-CAATGTTAACAGCTT 285690 Query 37114 CTTTAACTATATTAACAATAAC---TTCTTCAGTTGGGGGATATTTTAAATATTTA---A 37167 | || || | | |||| | ||||||| || | || | | |||| | Sbjct 285689 CACAAATAATCT---CCCTAACCCGTGCTTCAGTKGGT---TTRTTGATAAGTTTAGAGA 285636 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| || |||||||||||||| || | |||||| ||||| || || | ||||||||| Sbjct 285635 ACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGT 285576 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 ||||||||||| | ||| || | ||||||| ||| |||||||||||||| | |||| Sbjct 285575 GTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAG 285516 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 |||||||||| || |||||||| |||||||| || | | | || || |||| | Sbjct 285515 AAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAA---TGAAGCAG 285459 Query 37348 AATCAGA---AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | || |||||| || | | ||| | |||||| ||||||| | || | Sbjct 285458 TCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTAT 285399 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || || | || |||||||| |||| | || ||||||||||| | | Sbjct 285398 CAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAA 285339 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| |||||||| ||||| ||||| || || | | ||||| ||||||||||| || | Sbjct 285338 GACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTG 285279 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| || ||| || || | | || || | | | | ||||| || || |||| Sbjct 285278 CTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCAT 285219 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA---TTTGATA 37641 | || |||||||| || || || || ||| | |||| ||||| ||| | | | Sbjct 285218 CGCTGGCTGCAAAAAAGGCTAG--CACTTTTGACAAAAACCCTTTC-TCACTGTCCGTCA 285162 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701 | | |||| ||||| |||||||| || |||||||| || || ||||||| | Sbjct 285161 AAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAG 285102 Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC 37761 | | ||| || || | ||| | || ||| || |||||||||| |||||| | Sbjct 285101 CTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACC 285042 Query 37762 TAT 37764 ||| Sbjct 285041 TAT 285039 >seq628 Length=1115932 Score = 84.2 bits (92), Expect = 3e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| ||||| | || |||||||| || |||||| |||| || || || ||||||||||| Sbjct 723465 CATWACTCCACTCTTCTGATATTCGCCTACTCGTTTTTCAAAGAAGTTGGTCTTTCCTTC 723524 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 || || || || ||||| |||||||| ||||| Sbjct 723525 AAGAGAGATGTTCTCCATGAAATCAAAAGGATT 723557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592284874124480