Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3803 127 2e-24 >seq3803 Length=782546 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| || | | || | ||||| ||||| || || || || ||||| ||| Sbjct 742523 TTCCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 742464 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | || || || || || || | ||||||||| || |||| Sbjct 742463 TCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCG 742404 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||||||||| || |||||||| || ||| |||| | ||| || | ||| | Sbjct 742403 GGATGCCTTCTTTGTCCTGAATTTTCGTCTTCACATTTTCAATAGTATCGCTTGGTTCGA 742344 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||| | ||||| || || || |||||||| || ||||| ||||||||| Sbjct 742343 CTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCATG 742294 Score = 118 bits (130), Expect = 8e-22 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| || | | || | |||||| || || ||||| || || ||||| ||| Sbjct 742751 TTCCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGC 742692 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | ||| || || || ||||| | | ||||| || || | Sbjct 742691 TCAAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGG 742632 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||||||||| |||||||| ||| ||| ||| | || | ||||| | ||| | Sbjct 742631 GGATGCCTTCTTTGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGA 742572 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||| || | ||||| || || ||||| || || || |||||||| Sbjct 742571 CCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 101344 ACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTAC 101403 |||||| ||||| || || ||||||||||| ||||| || ||| |||||| | || | Sbjct 742876 ACGCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTTTGTCTTTACATTCTCAAT 742817 Query 101404 AGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463 || || | ||| |||||||| |||| ||||| || |||| ||||| || || || Sbjct 742816 GGTATCGCTTGGTTCGACTTCAAGGGTGATTGTTTTTCCTGTTAGTGTTTTGACGAAGAT 742757 Query 101464 CTGCAT 101469 |||||| Sbjct 742756 CTGCAT 742751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396257574579384