Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3597 100 4e-16 seq3803 98.7 1e-15 >seq3597 Length=814645 Score = 100 bits (110), Expect = 4e-16 Identities = 339/526 (64%), Gaps = 6/526 (1%) Strand=Plus/Plus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || || ||||||||| ||| | ||||||||||||| |||| ||| ||| ||| Sbjct 810291 AAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTT 810350 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || || | || || | ||||| | ||| ||||| | ||| ||| || ||||||| Sbjct 810351 AATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAG 810410 Query 18275 AATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTG- 18331 || || |||||||| ||| || || || | | |||||| |||| | | | | | Sbjct 810411 AAAATCCCCTCAACTGCA-GCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGA 810469 Query 18332 CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391 || | ||||| || | |||| | | | | ||| || | | || ||| Sbjct 810470 CTTA--ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATA 810527 Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451 |||||||| || | || ||||||| ||| || || ||||| || || || | | Sbjct 810528 GCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTG 810587 Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511 |||||||| || || || | ||||| | | ||||| | |||||| |||| || || Sbjct 810588 TACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCT 810647 Query 18512 GGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571 | ||| | || | |||||||| || | ||| || || || || || Sbjct 810648 TGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTG 810707 Query 18572 GATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTC 18631 | ||| ||||| || | || | | | || ||| ||| | ||| | | | | || Sbjct 810708 GCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTACTC 810767 Query 18632 CATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAA 18677 || |||| |||||||| ||| ||||||||||| |||||||| Sbjct 810768 CAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAA 810813 >seq3803 Length=782546 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || || |||||||| ||||| || || ||||||||| Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| ||||| | ||||| || || ||||||||||| || ||||| ||| Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAAATTCAGGACAAAGAAGGCATCCCGCCAGACCAA 742414 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTT 155989 || | | || | ||||| || ||||| |||||| | | ||||| Sbjct 742415 CAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTT 742461 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || ||||| |||||||| ||||| | || |||||| Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||||||| || || ||||| ||||||||||| || || || || Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| | || | || || || || || |||||| | | ||||| || || || Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAA 742701 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| | || |||||| | || | ||||| ||||| || Sbjct 742702 CATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGG 742749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731832552099200