Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3597 131 3e-25 seq1713 129 1e-24 seq3803 91.5 3e-13 >seq3597 Length=814645 Score = 131 bits (144), Expect = 3e-25 Identities = 381/591 (64%), Gaps = 6/591 (1%) Strand=Plus/Plus Query 49818 ATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAA 49877 || || |||||||||||| || | ||| || || || || | ||||||| Sbjct 810288 ATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGT 810347 Query 49878 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 49937 ||||||||||| | ||| || | |||||||| ||| ||||||| ||||||| || |||| Sbjct 810348 GTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAA 810407 Query 49938 AAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCA 49997 ||||| || ||||| || |||||||| | |||||| |||||| || || || Sbjct 810408 AAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAA--ATGAAGCAGTCT 810465 Query 49998 TCTAAT--ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTA 50055 | | | ||||| || |||| ||| | || ||||| | | | |||| | | || | Sbjct 810466 TYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAA 810525 Query 50056 TAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAG 50115 |||| |||||||| | ||| ||||| | || || | | Sbjct 810526 TAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGAC 810585 Query 50116 AATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTT 50175 |||||||| || || | | ||||| | | |||||| |||||| |||||||| Sbjct 810586 TGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTT 810645 Query 50176 CTGAATAC-TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 50234 || ||| || ||||| |||||| |||||| | ||| || |||||| ||||| Sbjct 810646 CT-TGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCG 810704 Query 50235 GATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 50294 ||||| || || |||| || | | | ||| ||| ||| | || | ||| | Sbjct 810705 CTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTA 810764 Query 50295 TCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354 ||| | | ||| || || || |||||||| | |||||||| || |||| Sbjct 810765 CTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 810824 Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACA 50405 | ||| || || | || ||| || ||| | ||| ||||||| |||| Sbjct 810825 GCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACA 810875 >seq1713 Length=288524 Score = 129 bits (142), Expect = 1e-24 Identities = 380/591 (64%), Gaps = 6/591 (1%) Strand=Plus/Minus Query 49818 ATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAA 49877 || || |||||||||||| || | ||| || || || || | ||||||| Sbjct 285633 ATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGT 285574 Query 49878 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 49937 ||||||||||| | ||| || | |||||||| ||| ||||||| |||||| || |||| Sbjct 285573 GTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAA 285514 Query 49938 AAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCA 49997 ||||| || ||||| || |||||||| | |||||| |||||| || || || Sbjct 285513 AAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAA--ATGAAGCAGTCT 285456 Query 49998 TCTAAT--ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTA 50055 | | | ||||| || |||| ||| | || ||||| | | | |||| | | || | Sbjct 285455 TYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAA 285396 Query 50056 TAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAG 50115 |||| |||||||| | ||| ||||| | || || | | Sbjct 285395 TAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGAC 285336 Query 50116 AATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTT 50175 |||||||| || || | | ||||| | | |||||| |||||| |||||||| Sbjct 285335 TGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTT 285276 Query 50176 CTGAATAC-TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 50234 || ||| || ||||| |||||| |||||| | ||| || |||||| ||||| Sbjct 285275 CT-TGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCG 285217 Query 50235 GATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 50294 ||||| || || |||| || | | | ||| ||| ||| | || | ||| | Sbjct 285216 CTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCAAAGTA 285157 Query 50295 TCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACG 50354 ||| | | ||| || || || |||||||| | |||||||| || |||| Sbjct 285156 CTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTAGT 285097 Query 50355 GATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACA 50405 | ||| || || | || ||| || ||| | ||| ||||||| |||| Sbjct 285096 GCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACA 285046 >seq3803 Length=782546 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 192327 TACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATC 192386 ||| | ||| | ||| | |||||| ||| || || || || || || |||| || Sbjct 742732 TACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTC 742673 Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 | |||||| ||||| || || | || ||||| ||||| || || |||||||| ||||| Sbjct 742672 AAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTTGTCTTG 742613 Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506 || || |||| ||||| || | || | ||| || || || ||||||||||| Sbjct 742612 AATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAATGGTTTT 742553 Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || || || | || ||||||||| Sbjct 742552 TCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984425609941200