Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq341 125 1e-22 seq4234 123 4e-22 seq113 123 4e-22 seq3072 118 2e-20 seq2729 114 2e-19 seq998 113 7e-19 seq3969 105 1e-16 seq677 86.0 1e-10 >seq341 Length=516008 Score = 125 bits (138), Expect = 1e-22 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| ||| ||| | | Sbjct 160270 TGTACTTGGTGACGGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGAA 160329 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || || || || |||||||||||||| | ||| || ||||| |||| Sbjct 160330 GAAGAAGACGGACAGCRGTCTGGATCTCGCGAGATGTGATGGTTGACTTCTTGTTGTAGT 160389 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| || || ||||||| |||| | || | ||||||||||| Sbjct 160390 GAGCG--AGGCGGGAAGCTTCRCCAGCGATGCGCTCGAAGACATCCTGAACAAACGAGTT 160447 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | ||||| || |||||| || || || || | || || Sbjct 160448 CATGATGGACATGGCTTTGCTTGAGATACCGGTGTCGGGATGGACTTGTTTCATGACTTT 160507 Query 1485708 GTA 1485710 ||| Sbjct 160508 GTA 160510 >seq4234 Length=23548 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| |||||| ||| ||| | | Sbjct 17896 TGTACTTGGTGACAGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGTA 17837 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || ||||||||||||||||| | ||| || |||||| | Sbjct 17836 GAAGAAGACGAACAGCGGTCTGGATCTCGCGAGATGTGATGGTTGACTTCTTGTTGTAGT 17777 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || |||||| || || ||||||| |||| | || | ||||| ||||||| Sbjct 17776 GAGCRAGGCGGGAAGCTTCACCAGCGATGCGCTCGAAGACATCCTGAACAAAAGAGTTCA 17717 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | |||| ||||||| || |||||| || ||||| || | || |||| Sbjct 17716 TGATGGACATGGCTTTGCTGGAGATACCAGTGTCGGGATGGACCTGTTTCATGACTTTGT 17657 Query 1485710 A 1485710 | Sbjct 17656 A 17656 >seq113 Length=1251524 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| |||||| ||| ||| | | Sbjct 136327 TGTACTTGGTGACAGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGTA 136268 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || ||||||||||||||||| | ||| || |||||| | Sbjct 136267 GAAGAAGACGAACAGCGGTCTGGATCTCGCGAGATGTGATGGTTGACTTCTTGTTGTAGT 136208 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || |||||| || || ||||||| |||| | || | ||||| ||||||| Sbjct 136207 GAGCRAGGCGGGAAGCTTCACCAGCGATGCGCTCGAAGACATCCTGAACAAAAGAGTTCA 136148 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | |||| ||||||| || |||||| || ||||| || | || |||| Sbjct 136147 TGATGGACATGGCTTTGCTGGAGATACCAGTGTCGGGATGGACCTGTTTCATGACTTTGT 136088 Query 1485710 A 1485710 | Sbjct 136087 A 136087 >seq3072 Length=1198 Score = 118 bits (130), Expect = 2e-20 Identities = 176/248 (71%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| || || |||||||||| | |||| ||| ||| | | Sbjct 384 TGTACTTGGTGACGGCYTTGGTGCCTTCACTGACGGCGTGCTTTGCCAATTCACCGGGAA 325 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGT--T 1485584 | || || || ||||||||||||||||| ||| | ||| || ||||| | Sbjct 324 GAAGAAGACGAACAGCGGTCTGGATCTCGCGAGAAGTGATGGTCGACTT---CTTGTTGT 268 Query 1485585 AGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGA 1485644 |||| ||| |||||| || || | ||||| || | | ||| | ||||| || Sbjct 267 AGTGAGCG--AGGCGGGAAGCTTCACCAGCAATGCGCTCAAAGACGTCTTGAACAAAGGA 210 Query 1485645 GTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| ||||| | |||| | ||||| || |||||| || || ||||| | || Sbjct 209 GTTCATGATGGACATGGCTTTGCTMGAGATACCAGTGTCGGGATGGACTTGCTTCATGAC 150 Query 1485705 CTTGTAAA 1485712 ||||| | Sbjct 149 TTTGTARA 142 >seq2729 Length=197075 Score = 114 bits (126), Expect = 2e-19 Identities = 170/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| | |||| ||| ||| | | Sbjct 179543 TGTACTTGGTGACGGCCTTGGTGCCTTCACTGACGGCGTGCTTTGCCAATTCACCGGGAA 179602 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || ||||||||||||||||| | ||| || |||||| | Sbjct 179603 GAAGAAGACGAACAGCGGTCTGGATCTCGCGAGAAGTGATGGTTGACTTCTTGTTGTAGT 179662 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || ||||| || || | ||||| |||| || || | |||||| ||||||| Sbjct 179663 GAGCAAGGCGAGAAGCTTCACCAGCAATGCGCTCGAACACATCTTGGACAAAGGAGTTCA 179722 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | |||| | ||||| || |||||| || || || || | || |||| Sbjct 179723 TGATGGACATGGCTTTGCTCGAGATACCAGTGTCGGGATGGACTTGTTTCATGACTTTGT 179782 Query 1485710 A 1485710 | Sbjct 179783 A 179783 >seq998 Length=2343502 Score = 113 bits (124), Expect = 7e-19 Identities = 171/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| |||| | ||| ||| | | Sbjct 1175527 TGTACTTGGTGACRGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCTAATTCACCGGGAA 1175468 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || || || |||||||||||||| || | ||| || ||||| |||| Sbjct 1175467 GAAGAAGACGAACAGCGGTCTGGATCTCACGAGATGTGATSGTTGACTTCTTGTTGTAGT 1175408 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| || || ||||||| |||| | || | ||||| ||||| Sbjct 1175407 GAGCG--AGGCGGGAAGCTTCACCAGCGATGCGCTCGAAGACATCCTGAACAAAGGAGTT 1175350 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | ||||| || |||||| || || || || | || || Sbjct 1175349 CATGATGGACATGGCTTTGCTTGAGATACCAGTGTCGGGATGGACTTGTTTCATGACTTT 1175290 Query 1485708 GTA 1485710 ||| Sbjct 1175289 GTA 1175287 Score = 109 bits (120), Expect = 9e-18 Identities = 171/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||| | ||| ||| | | Sbjct 795184 TGTACTTGGTGACGGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCTAATTCACCGGGAA 795243 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || || || |||||||| ||||| || | ||| || ||||| |||| Sbjct 795244 GAAGAAGACGAACAGCGGTCTGAATCTCACGAGATGTGATGGTTGACTTCTTGTTGTAGT 795303 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| || || ||||||| |||| | || | ||||||||||| Sbjct 795304 GAGCG--AGGCGGGAAGCTTCACCAGCGATGCGCTCGAAGACATCCTGAACAAACGAGTT 795361 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | || || || |||||| || || || || | || || Sbjct 795362 CATGATGGACATGGCTTTGCTTGAAATACCAGTGTCGGGATGGACTTGTTTCATGACTTT 795421 Query 1485708 GTA 1485710 ||| Sbjct 795422 GTA 795424 Score = 109 bits (120), Expect = 9e-18 Identities = 171/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| |||| | ||| ||| | | Sbjct 796832 TGTACTTGGTGACAGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCTAATTCACCGGGAA 796891 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || || || |||||||| ||||| || | ||| || ||||| |||| Sbjct 796892 GAAGAAGACGAACAGCGGTCTGAATCTCACGAGATGTGATGGTTGACTTCTTGTTGTAGT 796951 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| || || ||||||| |||| | || | ||||||||||| Sbjct 796952 GAGCG--AGGCGGGAAGCTTCACCAGCGATGCGCTCGAAGACATCCTGAACAAACGAGTT 797009 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | ||||| || |||||| || || || || | || || Sbjct 797010 CATGATGGACATGGCTTTGCTTGAGATACCGGTGTCGGGATGGACTTGTTTCATGACTTT 797069 Query 1485708 GTA 1485710 ||| Sbjct 797070 GTA 797072 >seq3969 Length=1085662 Score = 105 bits (116), Expect = 1e-16 Identities = 170/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| ||| ||| | | Sbjct 813962 TGTACTTGGTGACGGCCTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGAA 813903 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || || || ||||| |||||||| || | ||| || ||||| |||| Sbjct 813902 GAAGAAGACGTACAGCGGTTTGGATCTCACGAGATGTGATGGTTGACTTCTTGTTGTAGT 813843 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| || || | || || |||| | ||| | ||||| || || Sbjct 813842 GAGCG--AGGCGGGAAGCTTCACCAGCAATACGCTCGAAGACGTCTTGAACAAAGGARTT 813785 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | ||||| || |||||| || || || || | || || Sbjct 813784 CATGATGGACATGGCTTTGCTTGAGATACCAGTGTCGGGATGGACTTGTTTCATGACTTT 813725 Query 1485708 GTA 1485710 ||| Sbjct 813724 GTA 813722 >seq677 Length=445254 Score = 86.0 bits (94), Expect = 1e-10 Identities = 166/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||| ||||| ||||| || || || |||||| |||||| ||| || | | Sbjct 266022 TGTATTTGGTTACGGCTTTGGTGCCTTCGCTTACAGCGTGCTTGGCCAATTCACCAGGAA 265963 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || || ||||| |||||||| ||||| | ||||| |||||| ||| Sbjct 265962 GAAGGAGACGAACGGCTGTCTGGATTTCGCGTGAAGTAATCGTCGATTTCTTGTTGTAGT 265903 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || ||| ||||||| |||| | || | || || ||||| Sbjct 265902 GAGCG--AGGCGCGATGCTTCGCCAGCGATGCGCTCGAAGACATCCTGAACGAAAGAGTT 265845 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | |||| | ||||| || |||||| || || || || | || || Sbjct 265844 CATGATGGACATAGCTTTGCTAGAGATACCAGTGTCGGGATGGACTTGTTTCATGACTTT 265785 Query 1485708 GTA 1485710 ||| Sbjct 265784 GTA 265782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915787712892968