Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3803 111 2e-19 >seq3803 Length=782546 Score = 111 bits (122), Expect = 2e-19 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| |||| || || | | | || || || || || || Sbjct 742719 GTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA-TCTTCAAGTTGTTTTCC 742661 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | || ||||| || ||||||||||| ||||| |||||| || Sbjct 742660 AGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTTGTCTTGAATCTTTGTTTT 742601 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| |||||| | || || || || | ||| | |||||| || |||| ||| Sbjct 742600 CACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAATGGTTTTTCCCGTCAAAGT 742541 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 742540 CTTGACGAAAATCTGCAT 742523 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 133533 AGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCA 133592 || |||||||| || || ||||||||||| ||||| ||||||| ||| | | |||| Sbjct 742878 AGACGCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTTTGTCTTTACATTCTCA 742819 Query 133593 ACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAA 133652 | || ||| | || || || || | ||||| ||||| || || || ||||| ||||| Sbjct 742818 ATGGTATCGCTTGGTTCGACTTCAAGGGTGATTGTTTTTCCTGTTAGTGTTTTGACGAAG 742759 Query 133653 ATCTGCAT 133660 |||||||| Sbjct 742758 ATCTGCAT 742751 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || || | | | || || ||||| || || Sbjct 742491 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA-TCTTCAAGCTGTTTTCC 742433 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 ||| | ||||| ||||| ||||| || ||||||||||| ||||| ||| ||| | || Sbjct 742432 GGCGAAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTGTC-CTGAATTTTCGTCT 742374 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || ||| | || || || || | |||| || || || || | || Sbjct 742373 TCACATTTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAG 742314 Query 133642 TTTTTACGAAAATCTGCATGGCTTATTT 133669 | || || || ||||||||| | | ||| Sbjct 742313 TCTTCACAAAGATCTGCATGACGTTTTT 742286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483394743618880