Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3803 107 1e-18 >seq3803 Length=782546 Score = 107 bits (118), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || |||||||| | | || | || ||||| ||| || || ||| Sbjct 742533 AAAATCTGCATTCCTCCTCTCAACCTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATG 742474 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| ||| | || || | || || | ||||||||||| || || | |||||| Sbjct 742473 TTGTAGTCGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGT 742414 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| |||| | ||||||||||| ||||||| || | |||| || | || || Sbjct 742413 TGGTCTGGCGGGATGCCTTCTTTGTCCTGAATTTTC-GTCTTCACATTTTCAATAGTATC 742355 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||| || || | ||||| || || || ||||| || || |||||||||||||| Sbjct 742354 GCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 Score = 100 bits (110), Expect = 2e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| | | || | ||| |||||| |||||| || |||||||| ||| Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || | ||||||||| || || || | | || || || | || Sbjct 742689 AAAGTACGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGG 742630 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||| || ||||| |||| ||| ||||||||||| ||| || Sbjct 742629 ATGCCTTCTTTGTCTTGAATCTT-TGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGAC 742571 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || ||||| || || || || || || || |||||||| Sbjct 742570 CTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 87.8 bits (96), Expect = 1e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 33624 ACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC 33683 ||||||||||||| | || | ||||||||||| || || ||| | |||| ||| Sbjct 742876 ACGCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTT-TGTCTTTACATTCTCAA 742818 Query 33684 -GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGA 33742 ||| ||||||| ||| || |||| ||||| ||||| ||||||| ||||| || |||| Sbjct 742817 TGGTATCGCTTGGTTCGACTTCAAGGGTGATTGTTTTTCCTGTTAGTGTTTTGACGAAGA 742758 Query 33743 TCTGCAT 33749 ||||||| Sbjct 742757 TCTGCAT 742751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328686725783040