Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3803 125 2e-23 >seq3803 Length=782546 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || ||||| || |||||||||||||| ||| || Sbjct 742298 CAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGCGAT 742357 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || ||||| || |||||||| || ||| ||| || Sbjct 742358 ACTATTGAAAATGTGAAGACGAAAATTCAGGACAAAGAAGGCATCCCGCCAGACCAACAG 742417 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||| ||| | |||||||| | |||||| ||| |||||| || Sbjct 742418 CGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAACATC 742477 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384 ||||| |||||||||||||||||||| |||| Sbjct 742478 CAGAAGGAGTCTACTCTTCACCTTGTACTGAG 742509 Score = 109 bits (120), Expect = 1e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 |||||||||||| |||||||| || || ||| ||||| || || || || ||||| Sbjct 742606 AAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAACAAAGRCTCATATTYGCTGGAAA 742665 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || | |||||||| | |||||| ||| |||||| ||||||||||||| |||||||| Sbjct 742666 ACAACTTGAAGATGGCCGTACTTTGAGCGACTACAACATCCAGAAAGAGTCCACTCTTCA 742725 Query 206373 CCTTGTTTTGAGA 206385 ||||| ||||| Sbjct 742726 TCTTGTACTGAGA 742738 Score = 100 bits (110), Expect = 7e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 204758 CTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCA 204817 |||| |||||||||||||||||||| ||||||| || ||||| |||||| | ||| Sbjct 742509 CTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA 742450 Query 204818 TCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||| |||||||||||||| || || ||||| Sbjct 742449 TCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTG 742412 Score = 84.2 bits (92), Expect = 5e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 ||||| ||||| |||||||| ||||||||||||| || ||||| |||||| | || Sbjct 742738 TCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCC 742679 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||| || || ||||| || || || || | |||||| Sbjct 742678 ATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTG 742640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181755507355352