Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4234 86.0 9e-11 seq2729 86.0 9e-11 seq341 86.0 9e-11 seq113 86.0 9e-11 >seq4234 Length=23548 Score = 86.0 bits (94), Expect = 9e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||| ||| ||||||| ||||||||||| ||||| | || | |||| ||||||| Sbjct 17694 CTCCAGCAAAGCCATGTCCATCATGAACTCTTTTGTTCAGGATGTCTTCGAGCGCATCGC 17753 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 || || ||||| || | || ||||||| || ||| | |||||||| Sbjct 17754 TGGTGAAGCTTCCCGCCTYGCTCACTACAACAAGAAGTCAACCATCACATCTCGCGAGAT 17813 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||||||| || || || | | | ||| ||| |||||| |||||||||| || || Sbjct 17814 CCAGACCGCTGTTCGTCTTCTTCTACCCGGTGAATTGGCCAAGCACGCCGTCAGTGAAGG 17873 Query 725138 CACCA 725142 ||||| Sbjct 17874 CACCA 17878 >seq2729 Length=197075 Score = 86.0 bits (94), Expect = 9e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||| | ||| ||||||| ||||||||||| |||||| | || || |||| ||||| | Sbjct 179745 CTCGAGCAAAGCCATGTCCATCATGAACTCCTTTGTCCAAGATGTGTTCGAGCGCATTGC 179686 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 || || |||||| || | || ||||||| || ||| | |||||||| Sbjct 179685 TGGTGAAGCTTCTCGCCTTGCTCACTACAACAAGAAGTCAACCATCACTTCTCGCGAGAT 179626 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||||||| || || || | | | ||| ||| |||| | |||||||||| || || Sbjct 179625 CCAGACCGCTGTTCGTCTTCTTCTTCCCGGTGAATTGGCAAAGCACGCCGTCAGTGAAGG 179566 Query 725138 CACCA 725142 ||||| Sbjct 179565 CACCA 179561 >seq341 Length=516008 Score = 86.0 bits (94), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||| | ||| ||||||| ||||||||||||||||| | || | |||| ||||||| Sbjct 160472 CTCAAGCAAAGCCATGTCCATCATGAACTCGTTTGTTCAGGATGTCTTCGAGCGCATCGC 160413 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 || || ||||| || | || ||||||| || ||| | |||||||| Sbjct 160412 TGGYGAAGCTTCCCGCCTCGCTCACTACAACAAGAAGTCAACCATCACATCTCGCGAGAT 160353 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 |||||| || || || || | | | ||| ||| |||||| |||||||||| || || Sbjct 160352 CCAGACYGCTGTCCGTCTTCTTCTTCCCGGTGAATTGGCCAAGCACGCCGTCAGTGAAGG 160293 Query 725138 CACCA 725142 ||||| Sbjct 160292 CACCA 160288 >seq113 Length=1251524 Score = 86.0 bits (94), Expect = 9e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||| ||| ||||||| ||||||||||| ||||| | || | |||| ||||||| Sbjct 136125 CTCCAGCAAAGCCATGTCCATCATGAACTCTTTTGTTCAGGATGTCTTCGAGCGCATCGC 136184 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 || || ||||| || | || ||||||| || ||| | |||||||| Sbjct 136185 TGGTGAAGCTTCCCGCCTYGCTCACTACAACAAGAAGTCAACCATCACATCTCGCGAGAT 136244 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||||||| || || || | | | ||| ||| |||||| |||||||||| || || Sbjct 136245 CCAGACCGCTGTTCGTCTTCTTCTACCCGGTGAATTGGCCAAGCACGCCGTCAGTGAAGG 136304 Query 725138 CACCA 725142 ||||| Sbjct 136305 CACCA 136309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177395299674544