Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3597 325 5e-84 seq1713 320 2e-82 seq25 165 1e-35 seq628 118 1e-21 >seq3597 Length=814645 Score = 325 bits (360), Expect = 5e-84 Identities = 622/916 (68%), Gaps = 18/916 (2%) Strand=Plus/Plus Query 39304 TTCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGT 39363 |||||| |||| || || |||| || || || | || || ||||| || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 39364 TTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttt 39423 || ||||| | ||| || |||||||| || ||| || || || | || || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 39424 tttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCAT 39483 | |||| || | | || |||||| || | |||||||| |||||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 39484 TTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT 39543 | || |||||||| | ||| | | ||| || || || || ||||| ||||| || Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAAT 810220 Query 39544 GTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAA-AT 39602 || || || || || ||| | ||| | | | || || | | | | | Sbjct 810221 GTTAACAGCTTCACAAATAATC----TCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAA 810276 Query 39603 GTTTA---AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659 ||||| ||||| ||||| || || ||||| || || || |||||||| || |||| || Sbjct 810277 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTT 810336 Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719 | ||||| ||| | ||| || | || ||||||||||| | ||| ||||| || |||| Sbjct 810337 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 810396 Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 ||| ||||||||||| || || || ||||| |||||||| || | ||| ||||| | Sbjct 810397 AAGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAA-- 810454 Query 39780 TTGTATCATTATGT------ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAG 39833 || | || | | |||||||| | ||| |||| || || | ||||||| Sbjct 810455 -TGAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAG 810513 Query 39834 GCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTAT 39893 | | || || ||||||||||| | | || ||||| || |||| || | || |||| Sbjct 810514 GGAAGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTAT 810573 Query 39894 CTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAA 39953 | || || ||||| |||||||| || ||||| || || || | || ||||| || |||| Sbjct 810574 CAATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAA 810633 Query 39954 AACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCA 40013 ||||||||||||| | |||||| ||| || |||||||| | | |||||| | Sbjct 810634 AACATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 810693 Query 40014 CTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 40073 | |||||||| || || |||||||| || | || | | | ||| ||| ||| | Sbjct 810694 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGT 810753 Query 40074 GTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 40133 ||||| || ||||||||||||||||||| || || |||||||| ||||||||| Sbjct 810754 CCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAA 810813 Query 40134 ACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAA 40193 || || ||| || ||||| | | ||||| || ||| || |||||||| | | Sbjct 810814 TGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATA 810873 Query 40194 CAAATCTATTTGGATT 40209 |||| |||| |||||| Sbjct 810874 CAAACCTATGTGGATT 810889 >seq1713 Length=288524 Score = 320 bits (354), Expect = 2e-82 Identities = 620/916 (68%), Gaps = 18/916 (2%) Strand=Plus/Minus Query 39304 TTCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGT 39363 |||||| |||| || || |||| || || || | || || ||||| || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 39364 TTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttt 39423 || ||||| | ||| || |||||||| || ||| || || || | || || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 39424 tttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCAT 39483 | |||| || | | || |||||| || | |||||||| |||||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 39484 TTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT 39543 | || |||||||| | ||| | | ||| || || || || ||||| ||||| || Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAAT 285701 Query 39544 GTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAA-AT 39602 || || || || || ||| | ||| | | | || || | | | | | Sbjct 285700 GTTAACAGCTTCACAAATAATC----TCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAA 285645 Query 39603 GTTTA---AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659 ||||| ||||| ||||| || || ||||| || || || || ||||| || |||| || Sbjct 285644 GTTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTT 285585 Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719 | ||||| ||| | ||| || | || ||||||||||| | ||| ||||| || |||| Sbjct 285584 CATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAA 285525 Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 | | ||||||||||| || || || ||||| |||||||| || | ||| ||||| | Sbjct 285524 ATGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAA-- 285467 Query 39780 TTGTATCATTATGT------ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAG 39833 || | || | | |||||||| | ||| |||| || || | ||||||| Sbjct 285466 -TGAAGCAGTCTTYGACTTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAG 285408 Query 39834 GCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTAT 39893 | | || || ||||||||||| | | || ||||| || |||| || | || |||| Sbjct 285407 GGAAKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTAT 285348 Query 39894 CTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAA 39953 | || || ||||| |||||||| || ||||| || || || | || ||||| || |||| Sbjct 285347 CAATCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAA 285288 Query 39954 AACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCA 40013 ||||||||||||| | |||||| ||| || |||||||| | | |||||| | Sbjct 285287 AACATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTA 285228 Query 40014 CTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 40073 | |||||||| || || |||||||| || | || | | | ||| ||| ||| | Sbjct 285227 CAATTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGT 285168 Query 40074 GTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 40133 ||||| || ||||||||||||||||||| || || |||||||| ||||||||| Sbjct 285167 CCGTCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAA 285108 Query 40134 ACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAA 40193 || || ||| || ||||| | | ||||| || ||| || |||||||| | | Sbjct 285107 TGGAAGCTAGTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATA 285048 Query 40194 CAAATCTATTTGGATT 40209 |||| |||| |||||| Sbjct 285047 CAAACCTATGTGGATT 285032 >seq25 Length=601041 Score = 165 bits (182), Expect = 1e-35 Identities = 243/336 (72%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888 |||| ||| || || || ||||| ||||| ||| ||| || || ||||| || || Sbjct 247331 CCAGCAATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCA 247272 Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 | || ||||| || ||||| || | || ||||| || || || ||||| ||||| Sbjct 247271 TTCTTTGAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCA 247212 Query 69949 ATCATGTT-AAGAAGAAAACAGCTAGACATTTGATGA-TGTATAGTTCCCGCATTAAATA 70006 |||| | || |||||| ||||||||||| || | || | ||| || |||||||| | Sbjct 247211 GACATGGTCAACAAGAAA-CAGCTAGACATCTGTGGTCTGCA-AGTACCAGCATTAAACA 247154 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 ||| || ||||| |||||||||||||| ||||| | ||||||||||| ||||| || | Sbjct 247153 GTGTTGGTGATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAG 247094 Query 70067 ATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || ||||| ||| ||| || || | ||||| | ||||| ||||||||| || ||| Sbjct 247093 CATCAATATCTTCAC-CATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGT 247035 Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGAT 70161 || | ||| ||| || || | |||||||||| Sbjct 247034 TCAGCAACTTTGCCATTGATCTTTAGCAGGTATGAT 246999 Score = 104 bits (114), Expect = 3e-17 Identities = 132/179 (74%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| ||| ||||||| ||||| |||||||| ||||||| | ||||| ||||||| | Sbjct 246100 CACTGAATTGTTTTTTGGTTTCTTTGTGTAAGTTTGATACTTCAATTCTAGCTGCTAACA 246041 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCT 70452 |||||||||||||| | |||||| || | | ||||| ||||| ||||| | || || Sbjct 246040 ATGCATAGTCAGGATGCTTTGTAGT-CATGGATGCTGCAATTTCTGCAGCAAGAGTGTCC 245982 Query 70453 AATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGAT 70511 | ||| | || | ||||| ||||| | || | ||| |||| || | || ||||| Sbjct 245981 AGTTCAGTTGTCTTGACTCCTTTATAGATACCCTTTATAGCTTTAATAGTAATGTTGAT 245923 Score = 104 bits (114), Expect = 3e-17 Identities = 141/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 ||| || || ||||| || || ||||| || ||||||||||| ||||||| |||||| || Sbjct 247824 TTCCTCTTTCCCTGTGTTCTTCTTAAGGTCAAGAAACTCCATGATATCAGCATGCCAAGG 247765 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 |||||| || || || | | || |||| || ||||| || || || | ||||| || Sbjct 247764 TTCTAGGTAGATAGCAAAAGCACCTGGTCTCTTGTTTCCACCTTGGTCAACATATCTTGC 247705 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 |||| | | |||||| |||| | || | || ||||| || ||| ||| || | | Sbjct 247704 AGTGCTGTCATAGACCCTCAAAAGAGGGACTATTCCATTRGACACTCCA-TTGGTCTAAA 247646 Query 69834 AATATAACTTCCTCTT 69849 || ||||| || ||| Sbjct 247645 AACATAACAACCACTT 247630 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 69003 TAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACT 69062 ||||||| | || |||| ||||| || || || ||||||||||||||||||| ||| Sbjct 251218 TAATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACT 251159 Query 69063 ATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGAT 69122 || || | ||| | ||||||||||||||| || | || || || |||||||| || Sbjct 251158 TTCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAAT 251099 Query 69123 AGGTCTATGTCTCTTATTTGA 69143 ||||| || ||| |||| || Sbjct 251098 GGGTCTGTGCCTCATATTAGA 251078 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||| || ||||| | ||||| | || ||| || || ||||| || ||||| | ||| Sbjct 253290 TGAAACTCTCCAGACAGAACTCTTCTAGAGTAGATGTTGCTGGTGTAAGGTTCAATGGAT 253231 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| || |||||||| || ||||| ||||||||||| || || | | | || Sbjct 253230 TCATTATTACCAAGAATTTGTGCTGTTGAAGCAGTTGGCATTGGAGCAAGAAGAAGGCTG 253171 Query 68839 TTTCTAAGACCATG 68852 || |||||||| || Sbjct 253170 TTCCTAAGACCGTG 253157 >seq628 Length=1115932 Score = 118 bits (130), Expect = 1e-21 Identities = 167/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 39695 TTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCA 39754 || || ||||| || || ||||||||||| || |||||||| || ||||| || || ||| Sbjct 724375 TTCTTCAGCCAGAAGATTGCAGCAAAAGACCCRGAAAAGAAAATTCCTTCAACAGCAGCA 724434 Query 39755 AATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTTCTGTGCCCAA 39811 || ||||| | ||| || | | |||| | ||| | ||||| | | |||||| Sbjct 724435 AAGGCAACCACTCTTTCAGCAAAGCTTGCCCTTTCAGGGTTGATCCATTCAAGAGCCCAA 724494 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 | |||||||||| |||| || | ||||| |||||||| || | | || || | Sbjct 724495 TGAGCTTTCTTCATTACTGCGGGAAGTGTTTGGATAGCATTGAACAAGTTTTGYTTCTTT 724554 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTT 39927 ||||| |||| ||| | ||||| || ||||| ||||| ||||| ||||| || Sbjct 724555 TCACTGTCTTCAACGAGGGCTTCTATCAAAAGACTGTACATCTCTGARTGGATATT 724610 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 ||||||||| |||||||| || |||||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 |||| |||| ||| || ||||| ||||||| ||| || | || || ||| | || || Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | | ||| || || || || | || |||| | |||| || || || || Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAAACATGCAAA 724001 Query 39625 GTCACAATGTAGGCCCT 39641 ||||||||| || |||| Sbjct 724002 GTCACAATGGAGTCCCT 724018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686871775615680