Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3597 262 3e-65 seq1713 262 3e-65 seq628 91.5 1e-13 >seq3597 Length=814645 Score = 262 bits (290), Expect = 3e-65 Identities = 425/604 (70%), Gaps = 11/604 (2%) Strand=Plus/Minus Query 43688 AATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAA 43747 ||||| ||||||||| | ||||||||||| ||| ||| ||||||| | ||||| Sbjct 810889 AATCCACATAGGTTTGTATTATTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAG 810830 Query 43748 AAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-- 43805 ||||||| || || ||||||||| ||||||||||| | | |||||| || || Sbjct 810829 AAAGCACTAGCTTCCATTTGGACAGTCGAAGAAGTTGACCTAAGTAAAGA--TATCAATG 810772 Query 43806 ATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTT 43864 | |||| | | || | ||| || ||| ||| | || || | || |||||| Sbjct 810771 ACTGGAGTACTTTGACGG-ACAGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTT 810713 Query 43865 GCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCA 43923 || || ||||| || || || |||||| | ||| | || ||| |||||||| || Sbjct 810712 GCAGCCAGCGATGGAATTGTAGGAGAAAATCTTGTTGAAAGATTCTGC-CAAGAAGTACA 810654 Query 43924 ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGA 43983 | ||| ||||||| ||||||||||||| |||||| | | || || ||||| || || || Sbjct 810653 AGTACAAGAAGCAAGATGTTTTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGA 810594 Query 43984 AATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTT 44043 ||||||||||||| |||| ||||| |||||||| ||| | | || ||| || || || Sbjct 810593 AATGTACAGTCTTTTGATTGATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATT 810534 Query 44044 TAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT 44103 |||||| || || || | ||| ||| | || || | ||| | |||| ||||| Sbjct 810533 TAATGCTATTGATACCTTCCCTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT 810474 Query 44104 AAATTCAAA---TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCAT 44160 || || || || ||| ||||||||| || | || || ||||| | || || || || Sbjct 810473 TAAGTCRAAGACTGCTTCATTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGAT 810414 Query 44161 TTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGG 44220 ||||||||| || | ||||| || ||||| ||||| || || || || || | || || Sbjct 810413 TTTCTTTTCTGGTGCTTTTGCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGG 810354 Query 44221 GTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || || || ||||| |||| || | |||||||| | || || |||||||| || Sbjct 810353 ATTAACACACTCTAATGAACTAATCAGCAGAGATGAAGGTCTTCACTGTGATTTTGCATG 810294 Query 44281 CTTG 44284 |||| Sbjct 810293 CTTG 810290 >seq1713 Length=288524 Score = 262 bits (290), Expect = 3e-65 Identities = 424/604 (70%), Gaps = 11/604 (2%) Strand=Plus/Plus Query 43688 AATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAA 43747 ||||| ||||||||| | ||||||||||| ||| ||| ||||||| | ||||| Sbjct 285032 AATCCACATAGGTTTGTATTATTTCCAATTCAGCATCCAGACTTATGGCATTTCTACAAG 285091 Query 43748 AAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-- 43805 ||||||| || || ||||||||| ||||||||||| | | |||||| || || Sbjct 285092 AAAGCACTAGCTTCCATTTGGACAGTCGAAGAAGTTGACCTAAGTAAAGA--TATCAATG 285149 Query 43806 ATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTT 43864 | |||| | | || | ||| || ||| ||| | || || | || |||||| Sbjct 285150 ACTGGAGTACTTTGACGG-ACAGTGAGAAAGGGTTTTTGTCAAAAGTGCTAGCCTTTTTT 285208 Query 43865 GCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCA 43923 || || ||||| || || || |||||| | ||| | || ||| |||||||| || Sbjct 285209 GCAGCCAGCGATGGAATTGTAGGAGAAAATCTTGTTGAAAGATTCTGC-CAAGAAGTACA 285267 Query 43924 ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGA 43983 | ||| ||||||| ||||||||||||| |||||| | | || || ||||| || || || Sbjct 285268 AGTACAAGAAGCAAGATGTTTTTATGGCTTTCAAGTGACAATGGAGAATATCCACTCCGA 285327 Query 43984 AATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTT 44043 ||||||||||||| |||| ||||| |||||||| ||| | | || ||| || || || Sbjct 285328 AATGTACAGTCTTTTGATTGATACTTACATCAAGGATAAGGAAGAAAAGAATAAGTTATT 285387 Query 44044 TAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT 44103 |||||| || || || | ||| ||| | || || | ||| | |||| ||||| Sbjct 285388 TAATGCTATTGATACMTTCCCTTGTGTTAGTAAAAAGGCTGGATGGTCTATTAAGTGGAT 285447 Query 44104 AAATTCAAA---TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCAT 44160 || || || || ||| ||||||||| || | || || ||||| | || || || || Sbjct 285448 TAAGTCRAAGACTGCTTCATTTGGAGAAAGAATGGTWGCATTTGCTGCAGTTGAGGGGAT 285507 Query 44161 TTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGG 44220 ||||||||| || | ||||| || ||||| ||||| || || || || || | || || Sbjct 285508 TTTCTTTTCTGGTGCATTTGCAGCAATATTCTGGTTTAAAAAGCGTGGGTTATTACCAGG 285567 Query 44221 GTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || || || ||||| |||| || | || ||||| | || || |||||||| || Sbjct 285568 ATTAACACACTCTAATGAACTAATCAGCAGAGAYGAAGGTCTTCACTGTGATTTTGCATG 285627 Query 44281 CTTG 44284 |||| Sbjct 285628 CTTG 285631 >seq628 Length=1115932 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/238 (69%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAG 44029 ||||| || || || |||||||||||| ||||||| | | | |||| | | || Sbjct 724610 AATATCCAYTCAGAGATGTACAGTCTTTTGATAGAAGCCCTCGTTGAAGACAGTGAAAAG 724551 Query 44030 AAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGG 44089 || || ||||| ||||| || ||||| | || || | | | ||||| | ||| Sbjct 724550 AARCAAAACTTGTTCAATGCTATCCAAACACTTCCCGCAGTAATGAAGAAAGCTCATTGG 724491 Query 44090 GCCCTTAAATGGATAAATTC--AAATG--ATTCTTTTGGAGAACGACTTGTCGCGTTTGC 44145 || ||| ||||||| || | ||| | | |||| | ||| || | || || ||||| Sbjct 724490 GCTCTTGAATGGATCAACCCTGAAAGGGCAAGCTTT-GCTGAAAGAGTGGTTGCCTTTGC 724432 Query 44146 AGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203 | ||| ||||| ||||||||||| || || ||||| || || || ||| | |||||| Sbjct 724431 TGCTGTTGAAGGAATTTTCTTTTCYGGGTCTTTTGCTGCAATCTTCTGGCTGAAGAAA 724374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397435112693560