Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq25 100 4e-16 >seq25 Length=601041 Score = 100 bits (110), Expect = 4e-16 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 ||| |||| | |||||| || ||||| ||||||||| | ||||| | | ||||| Sbjct 247299 ATGAATGTTGAGCCCAATTCCACCAGCATTCTTTGAGATCAGTGCACATGTCTTGAGAGT 247240 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 ||||||| || | || ||| || ||| | | ||| || || |||||||| Sbjct 247239 CTCATAGATGCCTTCAATGCTGTCATCAGACATGGTCAACAAGAAACAGCTAGACATCTG 247180 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGG 112001 ||||| ||||||||||| || || ||||||| ||| ||| |||| ||| | | | Sbjct 247179 TGGTCTGCAAGTACCAGCATTAAACAGTGTTGGTGATGCATGAGTGAACCATTTC-TCAG 247121 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 | | | ||||||||| | | ||| |||||| ||||| || ||||| || | |||| Sbjct 247120 ATAAAAGATTGTATGTCTCAATGGCAGCATCAATATCTTCACCATGGATACCAACAGCGA 247061 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | | ||| | ||| | |||||| Sbjct 247060 CTCTCATCAGCATATGCTGTGG 247039 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 110680 AAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTC 110739 |||||| || | || |||||| ||||||||| | ||||| ||||||| | |||| Sbjct 253288 AAACTCTCCAGACAGAACTCTTCTAGAGTAGATGTTGCTGGTGTAAGGTTCAATGGATTC 253229 Query 110740 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 110799 ||||||||| | |||||||| || || || ||||||||||| || | | ||| ||||| Sbjct 253228 ATTATTACCAAGAATTTGTGCTGTTGAAGCAGTTGGCATTGGAGCAAGAAGAAGGCTGTT 253169 Query 110800 ACGAAGACC 110808 | |||||| Sbjct 253168 CCTAAGACC 253160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627998149075200