Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 2e-11 >seq25 Length=601041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/220 (69%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACATA 19173 ||| ||||||| || || |||||||| || || | || | || |||||||| Sbjct 247054 ATGAGAGTCGCTGTTGGTATCCATGGTGAAGATATT----GATGCTGCCATTGAGACATA 247109 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | | || | |||| | ||||| || || | || || || || || || ||||| Sbjct 247110 CAATCTTTTATCTGAGAAATGGTTCACTCATGCATCACCAACACTGTTTAATGCTGGTAC 247169 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 || || |||||||| ||||||||| | || | ||| |||||||||||||| || Sbjct 247170 TTGCAGACCACAGATGTCTAGCTGTTTCTTGTTGACCATGTCTGATGACAGCATTGAAGG 247229 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAG 19333 |||||| ||||| |||||| || || | ||||| ||| Sbjct 247230 CATCTATGAGACTCTCAAGACATGTGCACTGATCTCAAAG 247269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548495234513280