Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3803 141 1e-28 >seq3803 Length=782546 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || |||||||| ||| | || || || || | Sbjct 742295 ATGCAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC 742354 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| ||||| | |||||||||||||| || || || || |||||||| Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAAATTCAGGACAAAGAAGGCATCCCGCCAGACCAA 742414 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || || || || || |||| ||||| | ||| ||||| || Sbjct 742415 CAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGC-GACTACAA 742473 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| ||||| || |||||||| || || Sbjct 742474 CATCCAGAAGGAGTCTACTCTTCACCTTGT 742503 Score = 123 bits (136), Expect = 3e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | || || || || ||||| |||||||| || || | Sbjct 742522 AATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAG 742581 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| |||| | || ||||| ||||| || || || || || ||||| Sbjct 742582 CGACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCA 742641 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 || | || || || ||||| || ||||| || |||| ||||| | ||| ||||| | Sbjct 742642 ACAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGC-GACTACA 742700 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | |||| || || |||||||||||||| || Sbjct 742701 ACATCCAGAAAGAGTCCACTCTTCATCTTGT 742731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||| || || || || || || || || ||||| || || || | Sbjct 742750 AATGCAGATCTTCGTCAAAACACTAACAGGAAAAACAATCACCCTTGAAGTCGAACCAAG 742809 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| ||| | ||| | || || || ||||| || || || || ||||| || Sbjct 742810 CGATACCATTGAGAATGTAAAGACAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCA 742869 Query 27525 GCAGCGTCT 27533 ||||||||| Sbjct 742870 GCAGCGTCT 742878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570279660269440