Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4114 93.3 3e-14 seq3803 89.7 3e-13 >seq4114 Length=678496 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| | | ||| | ||| |||||| || || |||||||||||||| Sbjct 195454 CCMCCTCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTC 195513 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||||| | |||||||||||||| || ||||| || | |||||||||||| || || Sbjct 195514 AGTGTTCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGG 195572 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 34483 CCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGT 34542 |||||||| | | ||| | ||| |||||| || || |||||||||||||| ||| Sbjct 197704 CCTCTAAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGT 197763 Query 34543 GTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||||| | |||||||||||||| || ||||| || | |||||||||||| || || Sbjct 197764 GTTCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGG 197819 >seq3803 Length=782546 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TGAAAGTGTTCGCTCGTCTTCAAGTT 34561 || ||||| |||||| || ||||| || || | ||||| || | |||||||| | Sbjct 742497 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTA--CGGCCATCTTCAAGCT 742440 Query 34562 GTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCT 34621 |||| ||||| || || | |||||||||||| ||||| | || || ||||| ||| | Sbjct 742439 GTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTGTC-CTGAATT 742381 Query 34622 TTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACC 34679 || || || || | ||| || || | | | || ||||||| || || || || || Sbjct 742380 TTCGTCTTCACATTTTCAATAGTATCGCTTGGT-TCGACTTCCAAAGTGATAGTCTTTCC 742322 Query 34680 GGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || |||||||| ||||||||| Sbjct 742321 AGTTAAAGTCTTCACAAAGATCTGCATG 742294 Score = 84.2 bits (92), Expect = 1e-11 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || ||||| | | || || | ||| |||||| ||| || || ||||| || || | Sbjct 742749 CCTCCTCTCAATCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTC 742690 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | |||||||||||||| || || ||||| | | |||||||| || | Sbjct 742689 AAAGTA--CGGCCATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGG 742632 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTC 34655 | | || || |||||| ||| |||||||| || | ||| ||||| | | | || Sbjct 742631 GGATGCCTTCTTTGTCT-TGAATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGT-TC 742574 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||| || ||||| || || || || || || ||||||||||| Sbjct 742573 GACCTCAAGGGTAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314713060172696