Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3803 120 3e-22 >seq3803 Length=782546 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26957 TAAGAGCAA-TAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCG 27015 ||||||| | |||| | || || | ||| ||||||||| ||||| || ||| | || | Sbjct 742266 TAAGAGCCACTAAACTCTTAAA---AAACGTCATGCAGATCTTTGTGAAGACTTTAACTG 742322 Query 27016 GCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAA 27075 | ||| |||| ||| | ||||| ||||| ||| | ||||| | || || |||| Sbjct 742323 GAAAGACTATCACTTTGGAAGTCGAACCAAGCGATACTATTGAAAATGTGAAGACGAAAA 742382 Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135 |||| |||||||||||||| || || || ||||||||| | || | |||||| ||||| Sbjct 742383 TTCAGGACAAAGAAGGCATCCCGCCAGACCAACAGCGTCTCATCTTCGCCGGAAAACAGC 742442 Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184 | ||||| | || | ||| |||||||| || |||||||| || Sbjct 742443 TTGAAGATGGCCGTACTTTGAGCGACTACAACATCCAGAAGGAGTCTAC 742491 Score = 111 bits (122), Expect = 1e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || || | ||||| ||||| || ||||| | Sbjct 742523 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAGC 742582 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| ||| |||||||||||||||||||| || || || ||| Sbjct 742583 GACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 742642 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || |||||| | ||||| | || | ||| |||||| Sbjct 742643 CAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAAC 742702 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | ||| | || || | ||| | || || || Sbjct 742703 ATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGAGGAGGAAT 742752 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || || | || || |||||||| ||||| | Sbjct 742751 ATGCAGATCTTCGTCAAAACACTAACAGGAAAAACAATCACCCTTGAAGTCGAACCAAGC 742810 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || ||| || ||||||||||||||||| ||||| ||||| Sbjct 742811 GATACCATTGAGAATGTAAAGACAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAG 742870 Query 27108 CAGCGT 27113 |||||| Sbjct 742871 CAGCGT 742876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434894957898240