Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3803 150 4e-31 seq4114 84.2 5e-11 >seq3803 Length=782546 Score = 150 bits (166), Expect = 4e-31 Identities = 168/221 (76%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTC 210957 ||| || ||||| ||||||||||||||||| |||||||| || || | ||| | | | | Sbjct 742738 TCTCAGTACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAG-TACGGC 742680 Query 210958 CATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCT 211017 ||||||| || || || || || || || || | |||||||||||| || | ||||| | Sbjct 742679 CATCTTCAAGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTT 742620 Query 211018 TGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAG 211074 |||| || |||||| |||||| || || |||||||| ||| ||| ||||| || | Sbjct 742619 TGTCTTGAATCTTTGTTTTCACATTCTCAATGGTGTC---GCTTGGTTCGACCTCAAGGG 742563 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || || |||||||| | |||||| || || | ||||||| Sbjct 742562 TAATGGTTTTTCCCGTCAAAGTCTTGACGAAAATCTGCATT 742522 Score = 145 bits (160), Expect = 2e-29 Identities = 168/220 (76%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCC 210958 || || |||||||||||||| ||||| || |||||||| || || | ||| || | || Sbjct 742509 CTCAGTACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAA-AGTACGGCC 742451 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||| || || |||||||| || || |||||||| || || | ||||| || Sbjct 742450 ATCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTT 742391 Query 211019 GTCCTGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAG 211074 |||||| || ||| || ||||| ||||| || || || ||| ||| || || | || Sbjct 742390 GTCCTGAAT-TTTCGTCTTCACATTTTCAATAGTATC---GCTTGGTTCGACTTCCAAAG 742335 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| |||||||| || | |||||| ||||| | |||||| Sbjct 742334 TGATAGTCTTTCCAGTTAAAGTCTTCACAAAGATCTGCAT 742295 >seq4114 Length=678496 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || ||||| || |||||||| ||||| || ||||||||||| || || | Sbjct 195462 AAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGTTCG 195521 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||| || || || || || || || || || |||||||| || || Sbjct 195522 TCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGG 195572 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || ||||| || |||||||| ||||| || ||||||||||| || || | Sbjct 197709 AAGTCTGAGCACAAGATGTAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGTGTTCG 197768 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||| || || || || || || || || || |||||||| || || Sbjct 197769 TCCATCTTCAAGTTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGTGG 197819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159087959749880