Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1713 331 8e-86 seq3597 324 1e-83 seq628 91.5 1e-13 >seq1713 Length=288524 Score = 331 bits (366), Expect = 8e-86 Identities = 616/898 (69%), Gaps = 22/898 (2%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| ||| || || || | |||||| || || ||||| |||| || ||||| | Sbjct 285927 ACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGT 285868 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAG 4366 ||||| ||||||||||| ||| || || || || ||| | ||| | | || || Sbjct 285867 GAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCA-AG 285809 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || |||||||||| ||||| |||||||| || || || | ||| || | | ||| || Sbjct 285808 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 285749 Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 ||||| | | ||| || || || | ||| | ||||| | ||| || | || |||| Sbjct 285748 TCCAAGGAGA-TGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTT 285690 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA-AACAAT 4544 | || || || | | ||| || ||||| || | ||||| | | |||| Sbjct 285689 CACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAAGTTTAGAGAACATC 285631 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 || || ||||||||||| || | |||||| |||||||| || ||||| ||||| ||| Sbjct 285630 AAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTCATTAGAGTGTGTT 285571 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 ||||| || | ||| || | |||||||| ||| ||||| || ||||||| ||||||||| Sbjct 285570 AATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAATGCACCAGAAAAG 285511 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTC 4723 || || || || || || ||||| || || | || || || | ||| | ||| | | Sbjct 285510 AAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGAC 285451 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 |||||||| || | | ||| ||| ||||| |||| || || | || | ||||| Sbjct 285450 -TTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAKGTATCAATAGC 285392 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 |||||||| ||| | ||||| || | || ||||| || || | || || || Sbjct 285391 ATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTA 285332 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 |||||| || || ||||| || || | | ||||| || ||||| ||||| |||||| Sbjct 285331 CATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTG 285272 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 |||||| ||||| | || |||||||| || | ||||| ||| || || || ||||| Sbjct 285271 TACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGC 285212 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAA-------GTACTGTTCGTCAGGCTTAAGTT 5016 ||||||||| || | || | || | ||| ||||| ||||| ||| Sbjct 285211 TGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCA-----AAG-- 285159 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 | |||||| | ||||||| ||| ||||||||||| || ||||||| || ||| Sbjct 285158 TACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTA 285099 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||||| ||||| | | ||| | || |||| |||||| |||| || ||||| || Sbjct 285098 GTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCT 285041 >seq3597 Length=814645 Score = 324 bits (358), Expect = 1e-83 Identities = 615/898 (68%), Gaps = 22/898 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| ||| || || || | |||||| || || ||||| |||| || ||||| | Sbjct 809994 ACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGCCTTTCCTTCAAGT 810053 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAG 4366 ||||| ||||||||||| ||| || || || || ||| | ||| | | || || Sbjct 810054 GAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTTTGTAAAACCA-AG 810112 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 || |||||||||| ||||| |||||||| || || || | ||| || | | ||| || Sbjct 810113 GGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAGGTTACTGTTCAT 810172 Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 ||||| | | ||| || || || | ||| | ||||| | ||| || | || |||| Sbjct 810173 TCCAAGGAGA-TGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAATGTTAACAGCTT 810231 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA-AACAAT 4544 | || || || | | ||| || ||||| || | ||||| | | |||| Sbjct 810232 CACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGA-TAAGTTTAGAGAACATC 810290 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 || || ||||||||||| || | |||||| |||||||| || ||||| ||||| ||| Sbjct 810291 AAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTCATTAGAGTGTGTT 810350 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 ||||| || | ||| || | |||||||| ||| ||||| || ||||| | ||||||||| Sbjct 810351 AATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAAAGCACCAGAAAAG 810410 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTC 4723 || || || || || || ||||| || || | || || || | ||| | ||| | | Sbjct 810411 AAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGAAGCAGTCTTYGAC 810470 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 |||||||| || | | ||| ||| ||||| |||| || || | || | ||||| Sbjct 810471 -TTAATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGAAGGTATCAATAGC 810529 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 |||||||| ||| | ||||| || | || ||||| || || | || || || Sbjct 810530 ATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAATCAAAAGACTGTA 810589 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 |||||| || || ||||| || || | | ||||| || ||||| ||||| |||||| Sbjct 810590 CATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAACATCTTGCTTCTTG 810649 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 |||||| ||||| | || |||||||| || | ||||| ||| || || || ||||| Sbjct 810650 TACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAATTCCATCGCTGGC 810709 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAA-------GTACTGTTCGTCAGGCTTAAGTT 5016 ||||||||| || | || | || | ||| ||||| ||||| ||| Sbjct 810710 TGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCGTCA-----AAG-- 810762 Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 | |||||| | ||||||| ||| ||||||||||| || ||||||| || ||| Sbjct 810763 TACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGGAAGCTA 810822 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||||| ||||| | | ||| | || |||| |||||| |||| || ||||| || Sbjct 810823 GTGCTTTCTTGTAGAAATGCCATAAGTCTGGATGCTGAATTGGAAATAATACAAACCT 810880 >seq628 Length=1115932 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | ||||| ||||| ||||| || || || || |||| | || | ||| || Sbjct 723813 AGCCACTAACAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCAT 723872 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 |||||| ||| | ||||| || | || | ||||||||||| ||| || || || Sbjct 723873 TCCAATCAATTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATC 723932 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA 4546 | |||| || | ||| | | | || | ||||| || | ||||| || | || ||| || Sbjct 723933 TTTGATAATCTGTTTMACTGTTTCCTCTGATGGCTTGTGTACTAGGTGTTCATACATCAA 723992 Query 4547 ACACGCAAAATCACAATG 4564 ||| ||||| |||||||| Sbjct 723993 ACATGCAAAGTCACAATG 724010 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || ||||||||||| || || || || || || ||||| | | ||||||||| | || | Sbjct 724698 TCGATAGCAATCTGGAAACCATAGAAACACCTTGCTTCAGGGATTTGAACTTCTTGACTA 724757 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || | |||||| || || ||||| ||||| || || || || || || ||| Sbjct 724758 AAGCACTCAACAAGGTTTTCATTGACAATACCATCACTTGCAGCGAAGAAGGCTAAGACA 724817 Query 4983 TGAGATATAAAGTACTGTTCGTCA 5006 || || ||||||| |||| ||| Sbjct 724818 TGYGAGATAAAGTGGCGTTCATCA 724841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427027157475896