Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3597 333 4e-86 seq1713 327 2e-84 seq25 149 9e-31 seq628 102 1e-16 >seq3597 Length=814645 Score = 333 bits (368), Expect = 4e-86 Identities = 625/915 (68%), Gaps = 16/915 (2%) Strand=Plus/Plus Query 47828 TTCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGT 47887 |||||| |||| || || |||| ||||| || | || || ||||| || || |||| Sbjct 809982 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 810040 Query 47888 TTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttt 47947 || ||||| | ||| || ||||||||||| |||||| || ||| | || | || Sbjct 810041 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 810100 Query 47948 tttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCAT 48007 | |||| || | | || || ||| || | || ||||| || ||| ||| | Sbjct 810101 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 810160 Query 48008 TTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGAT 48067 | || |||||||| | || | | ||| || || || || ||||| | ||| || Sbjct 810161 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAAT 810220 Query 48068 AGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATG 48127 | ||||| || || ||| | ||| | | ||| | ||| | | | | Sbjct 810221 GTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAA---G 810277 Query 48128 TTTA---AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTC 48184 |||| ||||| || |||||||||||||| ||||||||||||||||| || |||| ||| Sbjct 810278 TTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCATCTCTGCTGATTAGTTC 810337 Query 48185 GTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAA 48244 ||||| ||| | || || | || ||||| ||||| | ||| |||||||| || || Sbjct 810338 ATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAA 810397 Query 48245 AGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GT 48300 || ||||||||||| || || || || || |||||||| | ||| ||||| | Sbjct 810398 AGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGA 810457 Query 48301 AACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA 48360 | | | ||| | | |||||| | ||| ||||||| || | |||||||| | Sbjct 810458 AGCAGTCTTYGACTTA-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 810516 Query 48361 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTA 48420 || || ||||||||||| | || ||||| | |||| || | ||||||||| | Sbjct 810517 AGGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 810576 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | |||||||| |||||||||||||| ||||| || |||| || ||||| || ||||||| Sbjct 810577 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 810636 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 |||| |||||| | ||||| || || |||| |||| | | ||| || ||| | Sbjct 810637 ATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAA 810696 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 ||||||| || || |||||||| |||| || | | | ||| ||| || || | Sbjct 810697 TTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCG 810756 Query 48601 TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATG 48660 ||| || ||||||||||||||||||| || || |||||||| ||||||||| | Sbjct 810757 TCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGG 810816 Query 48661 ATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTAT--TGGATTGGGAAAATAAC 48718 | || |||||| || || | || ||||| | ||| || || ||||| || | || Sbjct 810817 AAGCTAGTGCTTTCTTGTAGAAATGCCATAAGT--CTGGATGCTGAATTGGAAATAATAC 810874 Query 48719 AAATCTATTTGGATT 48733 ||| |||| |||||| Sbjct 810875 AAACCTATGTGGATT 810889 >seq1713 Length=288524 Score = 327 bits (362), Expect = 2e-84 Identities = 623/915 (68%), Gaps = 16/915 (2%) Strand=Plus/Minus Query 47828 TTCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGT 47887 |||||| |||| || || |||| ||||| || | || || ||||| || || |||| Sbjct 285939 TTCTTGC-ACATGACACCATTTTTCTGATACTCTGCTACTCGYTTCTCAAAGAAGTTAGC 285881 Query 47888 TTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttt 47947 || ||||| | ||| || ||||||||||| |||||| || ||| | || | || Sbjct 285880 CTTTCCTTCAAGTGAAATGTTTTCCATAAATGTAAATGGGTTTCCTGTGTGGTACACCTT 285821 Query 47948 tttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCAT 48007 | |||| || | | || || ||| || | || ||||| || ||| ||| | Sbjct 285820 TGTAAAACCAAGGGCAACAAGCAATCTGTCAGACACAAATTCAATGTATTGACCCATAAG 285761 Query 48008 TTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGAT 48067 | || |||||||| | || | | ||| || || || || ||||| | ||| || Sbjct 285760 GTTACTGTTCATTCCAAGGAGATGACATGGAAGGGCATCAGTCCAGAACTCCTTTTCAAT 285701 Query 48068 AGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATG 48127 | ||||| || || ||| | ||| | | ||| | ||| | | | | Sbjct 285700 GTTAACAGCTTCACAAATAATCTCCCTAACCCGTGCTTCAGTKGGTTTRTTGATAA---G 285644 Query 48128 TTTA---AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTC 48184 |||| ||||| || |||||||||||||| ||||||||||| ||||| || |||| ||| Sbjct 285643 TTTAGAGAACATCAAGCATGCAAAATCACAGTGAAGACCTTCRTCTCTGCTGATTAGTTC 285584 Query 48185 GTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAA 48244 ||||| ||| | || || | || ||||| ||||| | ||| |||||||| || || Sbjct 285583 ATTAGAGTGTGTTAATCCTGGTAATAACCCACGCTTTTTAAACCAGAATATTGCTGCAAA 285524 Query 48245 AGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GT 48300 | ||||||||||| || || || || || |||||||| | ||| ||||| | Sbjct 285523 TGCACCAGAAAAGAAAATCCCCTCAACTGCAGCAAATGCWACCATTCTTTCTCCAAATGA 285464 Query 48301 AACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA 48360 | | | ||| | | |||||| | ||| ||||||| || | |||||||| | Sbjct 285463 AGCAGTCTTYGACTTA-ATCCACTTAATAGACCATCCAGCCTTTTTACTAACACAAGGGA 285405 Query 48361 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTA 48420 || || ||||||||||| | || ||||| | |||| || | ||||||||| | Sbjct 285404 AKGTATCAATAGCATTAAATAACTTATTCTTTTCTTCCTTATCCTTGATGTAAGTATCAA 285345 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | |||||||| |||||||||||||| ||||| || |||| || ||||| || ||||||| Sbjct 285344 TCAAAAGACTGTACATTTCGGAGTGGATATTCTCCATTGTCACTTGAAAGCCATAAAAAC 285285 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 |||| |||||| | ||||| || || |||| |||| | | ||| || ||| | Sbjct 285284 ATCTTGCTTCTTGTACTTGTACTTCTTGGCAGAATCTTTCAACAAGATTTTCTCCTACAA 285225 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 ||||||| || || |||||||| |||| || | | | ||| ||| || || | Sbjct 285224 TTCCATCGCTGGCTGCAAAAAAGGCTAGCACTTTTGACAAAAACCCTTTCTCACTGTCCG 285165 Query 48601 TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATG 48660 ||| || ||||||||||||||||||| || || |||||||| ||||||||| | Sbjct 285164 TCAAAGTACTCCAGTCATTGATATCTTTACTTAGGTCAACTTCTTCGACTGTCCAAATGG 285105 Query 48661 ATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTAT--TGGATTGGGAAAATAAC 48718 | || |||||| || || | || ||||| | ||| || || ||||| || | || Sbjct 285104 AAGCTAGTGCTTTCTTGTAGAAATGCCATAAGT--CTGGATGCTGAATTGGAAATAATAC 285047 Query 48719 AAATCTATTTGGATT 48733 ||| |||| |||||| Sbjct 285046 AAACCTATGTGGATT 285032 >seq25 Length=601041 Score = 149 bits (164), Expect = 9e-31 Identities = 251/358 (70%), Gaps = 4/358 (1%) Strand=Plus/Minus Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296 |||| ||| || || |||||||| ||||| ||| |||| | ||| ||||| || || Sbjct 247331 CCAGCAATGTAGCTCCCACTTGCACGAATGTTATGAATGTTGAGCCCAATTCCACCAGCA 247272 Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 |||| || || || || || || | || || ||||| || || || |||||||| Sbjct 247271 TTCTTTGAGATCAGTGCACATGTCTTGAGAGTCTCATAGATGCCTTCAATGCTGTCATCA 247212 Query 78357 ATCATGTT-AAGAAGAAAACAGCTAGACATTTGATGA-TGAACAGTTCCTGCATTAAATA 78414 |||| | || |||||| ||||||||||| || | || | ||| || |||||||| | Sbjct 247211 GACATGGTCAACAAGAAA-CAGCTAGACATCTGTGGTCTGCA-AGTACCAGCATTAAACA 247154 Query 78415 ATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTG 78474 ||| || |||||||| || |||||||| ||||| | ||||||||||| ||||| || | Sbjct 247153 GTGTTGGTGATGCATGAGTGAACCATTTCTCAGATAAAAGATTGTATGTCTCAATGGCAG 247094 Query 78475 ATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTT 78534 || || || ||| || || || || || | ||||| ||||||||| || | || Sbjct 247093 CATCAATATCTTCACCATGGATACCAACAGCGACTCTCATCAGCATATGCTGTGGACGTT 247034 Query 78535 CAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592 || | || ||| || || | || ||||||| | ||| || | ||| |||| Sbjct 247033 CAGCAACTTTGCCATTGATCTTTAGCAGGTATGATCTACTCAATGTCTGGAAAACAAA 246976 Score = 116 bits (128), Expect = 5e-21 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 78060 TGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCAT 78119 ||||| || || ||||| ||||| ||||| || ||||||||||| ||||||| |||||| Sbjct 247826 TGTTCCTCTTTCCCTGTGTTCTTCTTAAGGTCAAGAAACTCCATGATATCAGCATGCCAA 247767 Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 |||||||| || || || | | | || |||| || || || || || || | |||||| Sbjct 247766 GGTTCTAGGTAGATAGCAAAAGCACCTGGTCTCTTGTTTCCACCTTGGTCAACATATCTT 247707 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||| | | ||| || ||||| | || | || || || || |||| ||| || | Sbjct 247706 GCAGTGCTGTCATAGACCCTCAAAAGAGGGACTATTCCATTRGACACTCCA-TTGGTCTA 247648 Query 78240 GAAATATAACTTCCACTT 78257 ||| ||||| |||||| Sbjct 247647 AAAACATAACAACCACTT 247630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 77412 AATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTA 77471 ||||| | || |||| ||||| || || || |||||||||||||||||| |||| Sbjct 251217 AATGCAGCATAGTAAAGGGTTTCAAAGATTTTTCGATTGAGATCTTGTGCTTCTTTACTT 251158 Query 77472 TCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATA 77531 ||||| | ||| | ||||||||| ||||| || | || || || ||||||||||| Sbjct 251157 TCAAAAGCATATCTCATAAGAATAAATGCATCGGCAAGACCTTGTACACCAATACCAATG 251098 Query 77532 GGTCTATGTCTCTTATTGGAAATTTTAGC 77560 ||||| || ||| |||| || || |||| Sbjct 251097 GGTCTGTGCCTCATATTAGATGTTCTAGC 251069 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||| |||||||||| ||||| | || ||| || || ||||| || ||||| | ||| Sbjct 253290 TGAAACTCTCCAGACAGAACTCTTCTAGAGTAGATGTTGCTGGTGTAAGGTTCAATGGAT 253231 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233 ||||| || || | |||||| || || |||||||||||||| || || Sbjct 253230 TCATTATTACCAAGAATTTGTGCTGTTGAAGCAGTTGGCATTGGAGC 253184 >seq628 Length=1115932 Score = 102 bits (112), Expect = 1e-16 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028 || |||||| ||||| || || || ||| |||||||| |||| |||||||| || | Sbjct 723822 CAATCTATCAGCAACAAACTCAATGTATTGTTTCATCAAATCACTGTTCATTCCAATCAA 723881 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 |||| |||| ||| || || || ||||||||||| ||| |||||||| || || Sbjct 723882 TTTACAAGGTAAAGCATCAGTTAGGAACTCTTGTTCAATAACAACAGCATCTTTGATAAT 723941 Query 48089 CGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCA 48146 | | | || |||||||| ||| || ||| | |||| | |||| ||||||||| Sbjct 723942 CTGTTTMACTGTTTCCTCTGATGGCTTGTGTAC--TAGGTGTTCATACATCAAACATGCA 723999 Query 48147 AAATCACAATGAAGACC 48163 || |||||||| || || Sbjct 724000 AAGTCACAATGGAGTCC 724016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694631357351680