Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3803 161 2e-34 >seq3803 Length=782546 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || |||||||| || ||| | || |||||||| || ||||| ||||| ||| ||| Sbjct 742526 CAGATTTTCGTCAAGACTTTGACGGGAAAAACCATTACCCTTGAGGTCGAACCAAGC--- 742582 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| ||||| || ||| ||||||||| ||||||||||| ||||| || ||||| Sbjct 742583 GACACCATTGAGAATGTGAAAACAAAGATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 742642 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||| | || || || || |||||||| || |||||||| | ||| | ||| || ||| Sbjct 742643 CAAAGRCTCATATTYGCTGGAAAACAACTTGAAGATGGCCGTACTTTGAGCGACTACAAC 742702 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || |||||||| ||||| | ||| Sbjct 742703 ATCCAGAAAGAGTCCACTCTTCATCTTGTACTGAGATTGAGA 742744 Score = 127 bits (140), Expect = 5e-24 Identities = 160/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || || ||||| ||| | || ||||| || ||||| | || || ||| ||| Sbjct 742298 CAGATCTTTGTGAAGACTTTAACTGGAAAGACTATCACTTTGGAAGTCGAACCAAGC--- 742354 Query 177981 GACACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCA 178039 || || || || || || || || ||| ||||||||||||||||| ||||| || ||||| Sbjct 742355 GATACTATTGAAAATGTGAAGACGAAA-ATTCAGGACAAAGAAGGCATCCCGCCAGACCA 742413 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 || || || |||||||||||||||||||| |||||||| | ||| | ||| || || Sbjct 742414 ACAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACTTTGAGCGACTACAA 742473 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 | |||| || || || || || || ||||| |||| Sbjct 742474 CATCCAGAAGGAGTCTACTCTTCACCTTGTACTGAG 742509 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/128 (77%), Gaps = 6/128 (5%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || ||||| ||||| || ||||||||||| |||||||| || || || |||| Sbjct 742754 CAGATCTTCGTCAAAACACTAACAGGAAAAACAATCACCCTTGAAGTCGAACCAAGC--- 742810 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || ||||| ||||| || || |||||| || ||||||||||| ||||| || || ||| Sbjct 742811 GATACCATTGAGAATGTAAAGACAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAG 742870 Query 178041 CAACGACT 178048 || || || Sbjct 742871 CAGCGTCT 742878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203664696860528