Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exaiptasia_20pallida_20[refseq_20GCF_5F001417965.1_202015-10-28] 4,312 sequences; 256,132,296 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3803 89.7 5e-13 >seq3803 Length=782546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| ||| ||||| ||||| |||||| | || || | || || Sbjct 742731 ACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCA 742672 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || || || || ||||| || | |||||||| | ||| | || || ||||| || Sbjct 742671 AGTTGTTTTCCAGCRAATATGAGYCTTTGTTGGTCAGGGGGGATGCCTTCTTTGTCT-TG 742613 Query 41774 ATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | |||| || || || | ||||||| | || ||||| | || || ||||| Sbjct 742612 AATCTTTGTTTTCACATTCTCAATGGTGTCGCTTGGTTCGACCTCAAGGGTAATGGTTTT 742553 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| |||||||||||||| Sbjct 742552 TCCCGTCAAAGTCTTGACGAAAATCTGCAT 742523 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||| | || || | || || ||||| || |||||||| Sbjct 742486 CTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCATCTTCAAGCTGTTTTCCGGCGAA 742427 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACG 41789 || || ||||||||||| | || | || || |||||| ||| |||| | ||||| Sbjct 742426 GATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTGTCC-TGAATTTTCGTCTTCACAT 742368 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | ||| ||||| | || || |||| || || || || || || | ||||| | Sbjct 742367 TTTCAATAGTATCGCTTGGTTCGACTTCCAAAGTGATAGTCTTTCCAGTTAAAGTCTTCA 742308 Query 41850 CGAAAATCTGCATG 41863 | || ||||||||| Sbjct 742307 CAAAGATCTGCATG 742294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462279081814400