Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1769 98.7 8e-16 >seq1769 Length=991018 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| |||| ||||| |||| ||| | || || || || || || || ||||| Sbjct 743669 CCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTG 743610 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || |||||||| ||||| ||| |||| | | ||| || ||| ||| Sbjct 743609 AGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGG 743550 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || ||||| ||||| | |||||| | | | | ||||| |||||| Sbjct 743549 ATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACC 743490 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | ||| || || || |||||||| Sbjct 743489 TCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| ||||| |||| || | || || |||||||| ||||| || || Sbjct 745265 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745206 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | || |||| ||| ||||| ||| |||| | | ||||| || || Sbjct 745205 AGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGA 745146 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || ||| ||| ||||| | | ||| ||| || | || || | Sbjct 745145 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACT 745086 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||| || || || ||||||||||| || ||||| Sbjct 745085 TCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| ||||| |||| || | || || |||||||| ||||| || || Sbjct 745493 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745434 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | || || | ||| ||||| ||| |||| || | ||||| || || Sbjct 745433 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGA 745374 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || ||| ||| ||||| | | ||| ||| || | || || | Sbjct 745373 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACT 745314 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||| || || || ||||||||||| || ||||| Sbjct 745313 TCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422248953748556