Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1769 113 4e-20 >seq1769 Length=991018 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || ||||| | |||||||| | || || || ||||| ||||||||||| || Sbjct 744581 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 744522 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | ||| || | |||||| ||||| | || |||||||| || || || || Sbjct 744521 AGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGA 744462 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||| || ||| ||||||| ||| || | || | ||| || || || || Sbjct 744461 ATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACT 744402 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | |||||||| |||| ||||| |||||||| ||||| Sbjct 744401 TCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||| | ||||| || | ||| || ||||| || ||||||||||| | Sbjct 744811 TACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCAC 744752 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | ||| || | ||| || ||||| | || |||||||| ||||| |||| Sbjct 744751 TGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAG 744692 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || || || |||||| || || | || | |||||| | || | || Sbjct 744691 GAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGT-TCA 744633 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || |||| || | || || || |||| ||||| ||||||||||||||| Sbjct 744632 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCATG 744582 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||| | |||||||| | || || ||||| || ||||||||||| | Sbjct 745039 TACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCAC 744980 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | ||| || | |||||| ||||| | || | ||| |||||||| |||| Sbjct 744979 TGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAG 744920 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || || || || | || | |||||| || || | Sbjct 744919 GAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAA 744860 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || |||| |||||| |||||||||||||| Sbjct 744859 CTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||| | |||||||| | || || |||||||| ||||||||||| | Sbjct 745723 TACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCAC 745664 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | ||| || | |||||| ||||| | || | ||| |||||||| |||| Sbjct 745663 TGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAG 745604 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || || || |||||| || || | || | |||||| | || | || Sbjct 745603 GAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGT-TCA 745545 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || | || | || || || |||| ||||| ||||||||||||||| Sbjct 745544 ACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCATG 745494 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||||||| | ||||| || | ||| || || ||||| ||||||||||| | Sbjct 743899 TACCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCAC 743840 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | |||||| | |||||| ||||| | || | || || ||||| |||| Sbjct 743839 TAAGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAG 743780 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || || || || | || | ||||| || ||| | Sbjct 743779 GAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAA 743720 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| ||||||| |||||||| ||||| ||||| Sbjct 743719 CTTCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||| | |||||||| | || || || ||||| ||||||||||| | Sbjct 745267 TACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCAC 745208 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | ||| || | ||| || ||||| | || | ||| |||||||| |||| Sbjct 745207 TGAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAG 745148 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || || || |||||| || || | |||| ||||| | || | || Sbjct 745147 GAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGT-TCA 745089 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || | || || || |||| ||||| |||||||||||||| Sbjct 745088 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || ||||| | |||||||| | || || || ||||| ||||||||||| || Sbjct 745493 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745434 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | ||| || | ||| || ||||| | || ||||| |||||||| ||||| Sbjct 745433 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGA 745374 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGAC 118690 ||||| || || || |||||| || || | |||| ||||| | || | || || Sbjct 745373 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGT-TCAAC 745315 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || |||| ||||| |||||||||||||| Sbjct 745314 TTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | ||| || || | ||| | || || || || || ||||||||||| || Sbjct 745950 ACCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACT 745891 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || | ||| || | ||| || ||||| | || |||||||| ||||| || || Sbjct 745890 GAGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGG 745831 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || ||||| ||||| || || | || | |||||| || || || Sbjct 745830 AATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCACTGGGTTCAAC 745771 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||| || |||| || || |||||||||||||| Sbjct 745770 TTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || || || | |||||||| | ||| || || ||||| |||||||| || | Sbjct 744355 TACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCAC 744296 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | || | ||| || | ||||| ||||| | || | ||| || ||||| || | Sbjct 744295 TGAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTG 744236 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| ||||| ||| || | || | ||||| | ||| | Sbjct 744235 GAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTA 744176 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || | || | || || || || || ||||| || |||||||||||| Sbjct 744175 CTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCATG 744126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433819872969772