Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1054 102 9e-17 seq933 95.1 1e-14 seq1020 93.3 5e-14 seq1748 89.7 6e-13 seq1526 89.7 6e-13 >seq1054 Length=2124587 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 60039 AACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCG 60098 || |||| || ||| | ||||| | ||||| || | |||||| |||||| ||||||||| Sbjct 832468 AATAAATAAAGTTTTCTAAAAAAATATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCG 832409 Query 60099 CGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 |||||||||||| ||||| |||||||||||| |||||| Sbjct 832408 CGTGACAGGCGGGGATACTTACCACTATACTAACGAGGA 832370 >seq933 Length=2349635 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 183607 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 183666 Query 60125 ATACTACCGAGGA-TTGAA 60142 |||||| |||||| ||||| Sbjct 183667 ATACTAACGAGGACTTGAA 183685 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 359682 AAAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 359741 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 359742 TTACCACTATACTAACGAGGA 359762 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 186373 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 186432 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 186433 ATACTAACGAGGA 186445 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||||| | ||| || | || ||| |||||| ||||||||||||||||||||| ||| Sbjct 184225 AAAAATTGACCTCCCCGTCGGGAAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 184284 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||| |||||| Sbjct 184285 CTTACCACTATACTAACGAGGA 184306 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| ||||| ||||||||||||||||||||| ||||| || ||| Sbjct 187685 TCTCCCCGTCGGGGAATTTAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACTACT 187626 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 187625 ATACTAACGAGGA 187613 >seq1020 Length=2255758 Score = 93.3 bits (102), Expect = 5e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1623656 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1623715 Query 60126 TACTACCGAGGA-TTGAATAT 60145 ||||| |||||| ||||| || Sbjct 1623716 TACTAACGAGGACTTGAAAAT 1623736 >seq1748 Length=1038726 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 62994 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 62935 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 62934 TACTAACGAGGA 62923 >seq1526 Length=1503564 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 13033 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 13092 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 13093 TACTAACGAGGA 13104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571803368889480