Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1769 134 1e-26 seq1795 89.7 4e-13 >seq1769 Length=991018 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| || |||| ||||||||||| || || ||||| ||||| || | Sbjct 744125 CCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTC 744066 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| ||| ||| ||||| || ||||| ||| | || |||||||| ||||| || Sbjct 744065 AATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGA 744006 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| ||||| |||||| ||| | ||| || |||| || || Sbjct 744005 ATACCTTCTTTATCTTGAATTT-TTGCTTTGACATTGTCAATGGTATCACTTGGTTCAAC 743947 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || || ||||||| ||||||||||| |||||||||||||| Sbjct 743946 TTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || |||| ||| || |||| |||||||||||||| ||||| |||||||| || Sbjct 743897 CCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTA 743838 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||| || || |||||||| ||| | || | | ||||||||| || Sbjct 743837 AGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGA 743778 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | |||||| | ||| |||||||| |||||| | Sbjct 743777 ATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACT 743718 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || |||| |||||||| |||||||| ||||||||||| Sbjct 743717 TCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| |||||| ||||||||||| || |||||||| || Sbjct 745037 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTG 744978 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| ||| |||||| || ||||| || ||| | || | | ||| ||||| || Sbjct 744977 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGA 744918 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | |||||| | ||| ||||||| ||| || | Sbjct 744917 ATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAACT 744858 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || |||| || ||||| ||||| |||||||| ||||| Sbjct 744857 TCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| |||||| |||||||| ||||| |||||||| || Sbjct 744581 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 744522 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| |||||| || ||||| || ||| | || || | ||||| || || Sbjct 744521 AGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGA 744462 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || ||||| ||||| |||||| ||| | | | || |||| ||| || Sbjct 744461 ATACCCTCTTTATCTTGAATTT-TTGCTTTGACATTATCTATGGTATCACTGGGTTCAAC 744403 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| ||||||| ||||| ||||| |||||||||||||| Sbjct 744402 TTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 107 bits (118), Expect = 1e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 || || |||| ||||||||||||||| ||||| ||||||||||| | ||| | | | Sbjct 744341 CTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCA 744282 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||||||||||||||| ||| | || | | ||||||||| || | ||||||||| Sbjct 744281 TCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 744222 Query 18231 TCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| | || || || | | | |||||||| ||||| ||| | || || Sbjct 744221 TCTTGGATTT-TGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAAT 744163 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || || | |||||| || ||||| ||||| Sbjct 744162 TGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| |||||| |||||||||||||| |||||||| || Sbjct 745721 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTG 745662 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| ||| |||||| || ||||| || ||| | || | | ||| ||||| || Sbjct 745661 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGA 745602 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| ||||| |||| | ||| || | ||| ||||| | || || | Sbjct 745601 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACT 745542 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || | || || ||||| ||||| |||||||| ||||| Sbjct 745541 TCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| ||||||||||||||||| || |||||||| || Sbjct 744809 CCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTG 744750 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| |||||| || || ||||| ||| | || || | |||||||| || Sbjct 744749 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGA 744690 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||| ||||| |||| | ||| || | ||| ||||| | || || | Sbjct 744689 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACT 744630 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || | || || ||||| ||||| |||||||| ||||| Sbjct 744629 TCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || | ||| || |||| |||||||| |||||||| || || |||||||| Sbjct 743669 CCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTG 743610 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | |||||||| || ||||| ||| | || | | ||||||||| ||| Sbjct 743609 AGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGG 743550 Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || || || ||| ||||| || || | ||| | |||| ||||| Sbjct 743549 ATACCCTCTTTGTCTTGAATCTTGTTT-TTCACATTCTCAATGGAATCACTCGGCTCCAC 743491 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | |||||||| | || ||||| ||||||||||| Sbjct 743490 CTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 >seq1795 Length=846455 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || ||||| |||||||| || |||||||| || |||| ||| ||||||||| ||| Sbjct 394848 TGGAGGGTTGACTCTTTTTGTATATTGTAGTCACTCAATGTTCTACCATCTTCCAACTGT 394789 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || || ||| |||| |||||||||||||| Sbjct 394788 TTTCCGGCAAAGATGAGTCTTTGTTGATC 394760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379334795099295