Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1753 104 5e-17 >seq1753 Length=1027297 Score = 104 bits (114), Expect = 5e-17 Identities = 204/295 (69%), Gaps = 10/295 (3%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGA 35212 || ||||||||||| || |||| ||| || ||||| | || ||||||||| |||||| Sbjct 984521 GACAGAACTGGAACGGGCACTCGATCAATATTTGGCACACAGATGAGGTTCAGCCTTCGA 984462 Query 35213 GACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAA 35272 | ||||| ||||| | || || ||||| | ||||||||| || || || |||||| Sbjct 984461 AATGACACCATTCCCCTCCTAACCACCAAACGAGTTTTCTGGAAGGGTGTAGTCGAAGAA 984402 Query 35273 CTCTCGTGGTTCAT--CAGGGGCAATACAGACGCCAAAGAATTGGC-CAAGAAGAAGATA 35329 || ||||| || | || ||| | | | ||| |||| | ||| || | Sbjct 984401 CTTCTTTGGTTTATTGCTGGTTCAACTAATGCTCTCAAG--CTGGCTGACAAAGGAG-TC 984345 Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAA--TTTTTGGACAGTAGAGGGTTATACGATA 35387 ||||||||| | || ||||| | ||| |||||||||| |||||| | |||| Sbjct 984344 CACATCTGGGATGCCAATGG--CAGTAGAACTTTTTTGGACAAATTAGGGTTTGAAGATA 984287 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGC 35442 | | || ||||||||||| || || ||||| || || ||| | ||| ||| || Sbjct 984286 GGGAGGAAGGAGATTTGGGGCCGGTTTACGGCTTTCAGTGGAGACATGCTGGGGC 984232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989558756021405