Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1829 118 1e-21 >seq1829 Length=5883334 Score = 118 bits (130), Expect = 1e-21 Identities = 82/93 (88%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 ||||||||||||||| ||||| || || || | |||||| |||||||||||||||||||| Sbjct 4211133 CATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTC 4211192 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATT 35946 ||| ||||||| ||||||||||| |||||||| Sbjct 4211193 TAAAGATATATGATCCATGAAATCAAATGGATT 4211225 Score = 114 bits (126), Expect = 2e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 ||||||||| || || || ||||| || ||||| || ||||| |||||||||| ||||| Sbjct 4220060 ATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAAACATGTTTTACAAAATG 4220119 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 36663 || || | | | || |||||||| || || ||||| ||||| |||||||| Sbjct 4220120 CTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTAGACATATCAACTTCTTC 4220179 Query 36664 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 36723 | ||||| || || || || ||| | || || | |||||||||| || | || || Sbjct 4220180 CGTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAGATGTCCTGGTGTTTTAT 4220239 Query 36724 TGGAAAAATAACAAATCT 36741 |||||||||||||| || Sbjct 4220240 CGGAAAAATAACAAACCT 4220257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658156419724440