Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1829 107 2e-18 >seq1829 Length=5883334 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| |||||||| || || || | ||||||||||||||| || |||||||||||||| Sbjct 4211134 ATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTCT 4211193 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGAC 13667 | ||||||| ||||| ||||||||||||||| |||| Sbjct 4211194 AAAGATATATGATCCATGAAATCAAATGGATTTTCTGAC 4211232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/171 (73%), Gaps = 9/171 (5%) Strand=Plus/Plus Query 13856 ATGTTTAAAAATTAAACACGCAAAATCACAATGAAG-GC---CCTCATCTCTACTAATAA 13911 || |||||| |||||||| ||| || || ||| || ||||||||||||| || | Sbjct 4218208 ATATTTAAATATTAAACA-GCAGCAT----ATCAAGCGCATACCTCATCTCTACTGATCA 4218262 Query 13912 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG 13971 | || || || |||| || ||||||| ||| ||||| || ||||||||||| | | Sbjct 4218263 GCTCATTGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATAGATG 4218322 Query 13972 CAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATC 14022 |||| || || ||||| || ||||| || || || ||||| || | |||| Sbjct 4218323 CAAAAGATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGCCACCAATC 4218373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479716060769400