Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1829 107 2e-18 >seq1829 Length=5883334 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| |||||||| || || || | |||||||||||||||||| |||||||||||||| Sbjct 4211134 ATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTCT 4211193 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGAC 13455 | ||||||| ||||| ||||| ||||||||| |||| Sbjct 4211194 AAAGATATATGATCCATGAAATCAAATGGATTTTCTGAC 4211232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 120/163 (74%), Gaps = 9/163 (6%) Strand=Plus/Plus Query 13644 ATGTTTAAAAATTAAACACGCAAAATCACAATGAAG-GC---CCTCATCTCTACTAATAA 13699 || |||||| |||||||| ||| || || ||| || ||||||||||||| || | Sbjct 4218208 ATATTTAAATATTAAACA-GCAGCAT----ATCAAGCGCATACCTCATCTCTACTGATCA 4218262 Query 13700 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG 13759 | || || || |||| || ||||||| ||| ||||| || ||||||||||| | | Sbjct 4218263 GCTCATTGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATAGATG 4218322 Query 13760 CGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 13802 | || ||||| ||||| || ||||| || || || ||||| || Sbjct 4218323 CAAAAGATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGC 4218365 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 14033 AAAATCTTTCTGCCAAG-TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAAT 14091 ||||| || || | || |||||||| ||||| ||||||||||| ||||| || ||||| Sbjct 4220043 AAAATGTTACTAACCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAA 4220102 Query 14092 ATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTA 14151 | | ||| | ||| | | ||| ||||| || | || |||||||| || | |||||| Sbjct 4220103 ACATGTTTTACAAAATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTA 4220162 Query 14152 GAAAGATCTACTTCATC 14168 || | ||| ||||| || Sbjct 4220163 GACATATCAACTTCTTC 4220179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478576889121240