Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1769 131 2e-25 >seq1769 Length=991018 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| || |||| || ||||||||||| ||||||||||| || | ||| || ||||| Sbjct 745704 AACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTC 745645 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | |||||||||||| | |||| |||||||||||| ||||| ||||||||||| || Sbjct 745644 TAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTG 745585 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 |||||| || | | || | ||||| | ||||| ||||| | || | ||||| Sbjct 745584 GATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTT 745525 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| ||||| || || || ||||| Sbjct 745524 CCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| || | | ||| ||||||| ||| |||||||| || ||||||||||| || Sbjct 744809 CCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTG 744750 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | || || |||||| | |||||||| || ||||| ||||| Sbjct 744749 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGA 744690 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||||||||| || |||||| || | | || | ||||| | ||||| ||| Sbjct 744689 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACT 744630 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||| || ||||| ||||| || || || ||||| Sbjct 744629 TCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| ||||||| ||| || || || || || |||||||| |||| ||| || || || Sbjct 744108 AACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCCTC 744049 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | || || |||||| | ||||| | ||||||||| || || || |||||||| || Sbjct 744048 CAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCTTG 743989 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||||||| ||| | | || | || || | ||||| ||||| | ||| | || || Sbjct 743988 AATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTT 743929 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| ||||||||||| || || ||||||||| Sbjct 743928 GCCAGTCAATGTTTTAACAAAAATTTGCATA 743898 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || || | | ||| || |||| || ||||| ||||| ||||||||||| || Sbjct 745494 GCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 745435 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || ||||| | || || |||||| | ||||||||||||||||| ||||| Sbjct 745434 GAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGG 745375 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||||||||| || |||||| || | | || | ||||| | ||||| || Sbjct 745374 AATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAAC 745315 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| ||||| || || || |||||| Sbjct 745314 TTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCATA 745266 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || || | | ||| || |||| || ||||| ||||| ||||||||||| || Sbjct 744582 GCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 744523 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || ||||| | |||||||||||| | |||||||| || || || || || Sbjct 744522 GAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGG 744463 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || ||||| || ||||||| ||| | | || | || || ||||||| || Sbjct 744462 AATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAAC 744403 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | || ||||| ||||| ||||| || || ||||||||| Sbjct 744402 TTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCATA 744354 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || ||||| | | ||| ||||||| ||| ||||| ||||| ||||||||||| || Sbjct 743897 CCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTA 743838 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || || || | ||||| |||||| | |||| ||||| ||||| ||||| Sbjct 743837 AGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGA 743778 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || || || || | | || | ||||| |||| || ||| Sbjct 743777 ATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACT 743718 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | || || |||||||| ||||||||||| ||||||||| Sbjct 743717 TCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCATA 743670 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| || |||| || |||||||| || ||||||||||| || | ||| || ||||| Sbjct 745020 AACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTC 744961 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | |||||||||||| | |||| |||||||||||| ||||| || ||||| || || Sbjct 744960 TAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTG 744901 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 || || || | | || | ||||| ||||||| ||||||| || | || || Sbjct 744900 GATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTT 744841 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| ||||| || || || |||||| Sbjct 744840 CCCAGTCAAAGTTTTGACAAAAATCTGCATA 744810 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| || |||| || ||||| ||||| ||||||||||| || | || || ||||| Sbjct 745248 AACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTC 745189 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | || || |||||| | |||| |||||||||||| ||||| ||||||||||| || Sbjct 745188 CAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTG 745129 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 |||||| || | | || | ||||| | ||||| ||||| | || | ||||| Sbjct 745128 GATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTT 745069 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| ||||| || || || |||||| Sbjct 745068 CCCTGTCAAGGTTTTGACAAAAATCTGCATA 745038 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || ||||| || || ||||||||||| || | || || ||||| | || Sbjct 745925 TGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGC 745866 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| | |||||||| || ||||| || || || ||||||||||| ||||| Sbjct 745865 TTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 745806 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||||| ||||||| ||||| | ||| | ||| || || ||| Sbjct 745805 GCCTTCACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTC 745746 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 || || || || || || |||||| Sbjct 745745 AAGGTCTTGACAAAAATCTGCATA 745722 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||||| |||||||||||| || || ||||| || || | || || ||||| Sbjct 743651 ACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCC 743592 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || |||||| | || | ||| || ||||| || || || || |||||||| | Sbjct 743591 AGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGA 743532 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || | ||| | | || | | || | || || || || | || | |||||| Sbjct 743531 ATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTG 743472 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || |||||||| |||||||| Sbjct 743471 CCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507001781679120