Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1769 91.5 9e-14 >seq1769 Length=991018 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/216 (71%), Gaps = 14/216 (6%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTG-GTCATC 33219 |||||||| | ||| || || ||||| || ||||||||| | || | ||| | |||| Sbjct 743879 ACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCA--CTAA--GGGTTCTGCCATC 743824 Query 33220 C---AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276 | || || || ||| ||| || || ||||| || || | || || ||||| || || Sbjct 743823 CTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATC 743764 Query 33277 GCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 ||| |||| | || | | ||| ||||| |||| | ||| ||||| ||||| Sbjct 743763 TTGGATCTTGGCCT---TGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTAT 743707 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||||| || | |||||||||||||||||||| Sbjct 743706 TGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | ||| ||||| || || |||||||||||| ||| | || ||| Sbjct 744107 ACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCCTCC 744048 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || ||||| ||| ||| || | | |||||| || | || || |||||||| || | Sbjct 744047 AACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCTTGA 743988 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || | | ||| || || | |||| ||| |||||||| || ||||| Sbjct 743987 ATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTTG 743928 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | ||||| || ||||||||||| Sbjct 743927 CCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318769864761918