Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1829 105 6e-18 >seq1829 Length=5883334 Score = 105 bits (116), Expect = 6e-18 Identities = 126/166 (76%), Gaps = 5/166 (3%) Strand=Plus/Plus Query 13139 TTAAACATCATACATGCA--AAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGT 13196 ||||| || | ||| ||| | |||| || ||| ||| |||||||||| || ||||| | Sbjct 4218212 TTAAATATTAAACA-GCAGCATATCA-AGCGCATACCT-CATCTCTACTGATCAGCTCAT 4218268 Query 13197 TTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256 | || |||||||| ||||| | || ||||| || | ||||||||||| ||||| | Sbjct 4218269 TGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATAGATGCAAAAG 4218328 Query 13257 AACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCT 13302 | || |||||||| |||||||| || |||||||| || | ||| || Sbjct 4218329 ATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGCCACCAATCT 4218374 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 12847 CATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTC 12906 |||||| |||||| || || || | |||||||||||||||||| || ||||| ||||| Sbjct 4211133 CATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTC 4211192 Query 12907 TAACGAAATATTTTCCATAAAATCGAAAGGATTTT 12941 ||| || |||| ||||| ||||| || ||||||| Sbjct 4211193 TAAAGATATATGATCCATGAAATCAAATGGATTTT 4211227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430971942077382