Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1769 190 5e-43
seq1829 98.7 2e-15
seq1795 95.1 3e-14
>seq1769
Length=991018
Score = 190 bits (210), Expect = 5e-43
Identities = 171/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || | ||| | ||| ||||||||||| || || || ||| || ||||||||
Sbjct 744797 CTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCA 744738
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
||||||| || || ||||||||||| || | ||||||||||||||| || |||||||||
Sbjct 744737 TCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTA 744678
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
||||| || ||||| || ||||| || | ||| ||||| ||||| || || |||||||||
Sbjct 744677 TCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATA 744618
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || | ||||| ||||| ||||||||
Sbjct 744617 GTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583
Score = 179 bits (198), Expect = 9e-40
Identities = 158/197 (80%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||| || || || || ||| || |||||||| ||||||| ||||| |||
Sbjct 745691 GTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCA 745632
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | | || ||||||||||| || |||||||||||||| || ||||| ||
Sbjct 745631 GCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745572
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||||| ||||| || ||||||||||||||||| ||||| | |||
Sbjct 745571 ACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTT 745512
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 745511 TTGACAAAAATCTGCAT 745495
Score = 170 bits (188), Expect = 4e-37
Identities = 156/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || || ||| || |||||||| ||||||| || || |||
Sbjct 745463 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCA 745404
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | || ||||||||||| || |||||||||||||| || ||||| ||
Sbjct 745403 GCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745344
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||||| ||||| || ||||||||||||||||| ||||| | |||
Sbjct 745343 ACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTT 745284
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 745283 TTGACAAAAATCTGCAT 745267
Score = 163 bits (180), Expect = 7e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || | ||| | ||||||||||||||| ||||| |||||| || ||||| ||
Sbjct 743657 CTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCA 743598
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
||||| || || || ||||||||||||| | ||||||||| || || || || |||||
Sbjct 743597 TCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTG 743538
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
|| |||||||| ||| ||||| || | || ||| || || || ||||||| || |||
Sbjct 743537 TCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATA 743478
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| || ||||| || || |||||
Sbjct 743477 GTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443
Score = 159 bits (176), Expect = 8e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| || || || | ||| | ||| || || ||||||||||| || ||| | ||||||
Sbjct 744116 AGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTA 744057
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || | || || ||||||||||| || || || ||||| || || || ||||||
Sbjct 744056 CCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCT 743997
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
||||| ||||| |||||||| ||||| || | |||||| || ||||| || || || |||
Sbjct 743996 TTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTA 743937
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||||| | |||||| ||||| || |||||
Sbjct 743936 ATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 104344 CCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACC 104403
||| || || | || | ||| ||||| || || || || |||||| || ||||| ||
Sbjct 744342 CCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCC 744283
Query 104404 GTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463
||||| | |||||| ||||||||||||| | |||||||| || || || ||||| ||
Sbjct 744282 ATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTT 744223
Query 104464 ATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAAT 104523
||| || || || ||||| ||||| |||| || || || || ||||| || | ||||||
Sbjct 744222 ATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAAT 744163
Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| |||||||||||||| || || ||||||||
Sbjct 744162 TGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127
Score = 158 bits (174), Expect = 3e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || || ||| || |||||||| ||||||| ||||| |||
Sbjct 744551 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCA 744492
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | |||||| || || || || || |||||||| ||||| ||||||||
Sbjct 744491 GCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTTGCTTTG 744432
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| |||| |||||| || ||||| || || ||||| || || || ||||| | |||
Sbjct 744431 ACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTT 744372
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 744371 TTGACAAAAATTTGCAT 744355
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||||||||| || || || ||| || |||||||| ||||||| ||||| |||
Sbjct 745007 GTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCA 744948
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | | || ||||| ||||| || ||||| ||||| || ||||| || ||
Sbjct 744947 GCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTG 744888
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || ||||| || || |||||||| || || ||||| | |||
Sbjct 744887 ACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTT 744828
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 744827 TTGACAAAAATCTGCAT 744811
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || || ||| || |||||||| ||||| | || || |||
Sbjct 745235 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGCTTGCCA 745176
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | | || ||||||||||| || |||||||||||||| || ||||| ||
Sbjct 745175 GCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745116
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||||| ||||| || || |||||||||||||| || || | |||
Sbjct 745115 ACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTT 745056
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 745055 TTGACAAAAATCTGCAT 745039
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || || ||| || ||||| || ||||| | || || |||
Sbjct 745919 GTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGCTTGCCA 745860
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | ||||||||| || || || |||||||| ||||| || || || ||
Sbjct 745859 GCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGCCTTC 745800
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || ||||| || || | || || || || ||||| | ||
Sbjct 745799 ACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTCAAGGTC 745740
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 745739 TTGACAAAAATCTGCAT 745723
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || | ||| | ||| ||||| || || || || || ||| || ||||| ||
Sbjct 743885 CTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCA 743826
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
|| |||| ||||| ||||||||||| | | |||||||| ||||| || ||||| |||
Sbjct 743825 TCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTA 743766
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
|| || ||||| || || ||||| || | || || || || || || || ||||| ||
Sbjct 743765 TCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATT 743706
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || | |||||||| || || |||||
Sbjct 743705 GTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671
>seq1829
Length=5883334
Score = 98.7 bits (108), Expect = 2e-15
Identities = 103/133 (77%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 268919 GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATT 268978
||||| || |||| |||||| | | ||| || || |||||||||||||| ||||| |||
Sbjct 4219891 GAGGTGCAACTTCCCGAAGCCCGCTTTTTCTATGGCTTCCAGATAGCTATTGAAAACATT 4219832
Query 268979 CATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAA 269038
|||||||| ||||||||||| | ||||| || || ||| | ||| | |||||| |
Sbjct 4219831 CATTCAGAAATGTACAGTCTCCTCATAGAAACATACATACAGGATTCAGATGAAAAG-TA 4219773
Query 269039 AGACTATTTTCTT 269051
|| || |||||||
Sbjct 4219772 AGTCT-TTTTCTT 4219761
>seq1795
Length=846455
Score = 95.1 bits (104), Expect = 3e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391
||| ||||| | ||| || || ||||| | || || ||||| || ||||| ||||||
Sbjct 394873 TCCGCCTCTCAACCTTAGAACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACT 394814
Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451
| |||||||| ||||| | |||||||| ||||| || || || ||||||||||||||
Sbjct 394813 CAATGTTCTACCATCTTCCAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGG 394754
Query 104452 TATTCCT 104458
|| |||
Sbjct 394753 AATACCT 394747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151369028186628
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