Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1769 190 5e-43 seq1829 98.7 2e-15 seq1795 95.1 3e-14 >seq1769 Length=991018 Score = 190 bits (210), Expect = 5e-43 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || | ||| | ||| ||||||||||| || || || ||| || |||||||| Sbjct 744797 CTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCA 744738 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||||| || || ||||||||||| || | ||||||||||||||| || ||||||||| Sbjct 744737 TCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTA 744678 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| || ||||| || ||||| || | ||| ||||| ||||| || || ||||||||| Sbjct 744677 TCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATA 744618 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || | ||||| ||||| |||||||| Sbjct 744617 GTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 179 bits (198), Expect = 9e-40 Identities = 158/197 (80%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| || || || || ||| || |||||||| ||||||| ||||| ||| Sbjct 745691 GTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCA 745632 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | || ||||||||||| || |||||||||||||| || ||||| || Sbjct 745631 GCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745572 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct 745571 ACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTT 745512 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 745511 TTGACAAAAATCTGCAT 745495 Score = 170 bits (188), Expect = 4e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || || || || ||| || |||||||| ||||||| || || ||| Sbjct 745463 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCA 745404 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | || ||||||||||| || |||||||||||||| || ||||| || Sbjct 745403 GCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745344 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||||| ||||| || ||||||||||||||||| ||||| | ||| Sbjct 745343 ACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTT 745284 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 745283 TTGACAAAAATCTGCAT 745267 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || | ||| | ||||||||||||||| ||||| |||||| || ||||| || Sbjct 743657 CTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCA 743598 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| || || || ||||||||||||| | ||||||||| || || || || ||||| Sbjct 743597 TCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTG 743538 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || |||||||| ||| ||||| || | || ||| || || || ||||||| || ||| Sbjct 743537 TCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATA 743478 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| || ||||| || || ||||| Sbjct 743477 GTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || | ||| | ||| || || ||||||||||| || ||| | |||||| Sbjct 744116 AGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTA 744057 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || | || || ||||||||||| || || || ||||| || || || |||||| Sbjct 744056 CCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCT 743997 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||||| ||||| |||||||| ||||| || | |||||| || ||||| || || || ||| Sbjct 743996 TTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTA 743937 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| | |||||| ||||| || ||||| Sbjct 743936 ATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104344 CCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACC 104403 ||| || || | || | ||| ||||| || || || || |||||| || ||||| || Sbjct 744342 CCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCC 744283 Query 104404 GTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463 ||||| | |||||| ||||||||||||| | |||||||| || || || ||||| || Sbjct 744282 ATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTT 744223 Query 104464 ATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAAT 104523 ||| || || || ||||| ||||| |||| || || || || ||||| || | |||||| Sbjct 744222 ATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAAT 744163 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| |||||||||||||| || || |||||||| Sbjct 744162 TGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || || || || ||| || |||||||| ||||||| ||||| ||| Sbjct 744551 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCA 744492 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | |||||| || || || || || |||||||| ||||| |||||||| Sbjct 744491 GCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTTGCTTTG 744432 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| |||| |||||| || ||||| || || ||||| || || || ||||| | ||| Sbjct 744431 ACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTT 744372 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 744371 TTGACAAAAATTTGCAT 744355 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || || ||| || |||||||| ||||||| ||||| ||| Sbjct 745007 GTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCA 744948 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | || ||||| ||||| || ||||| ||||| || ||||| || || Sbjct 744947 GCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTG 744888 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || ||||| || || |||||||| || || ||||| | ||| Sbjct 744887 ACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTT 744828 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 744827 TTGACAAAAATCTGCAT 744811 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || || || || ||| || |||||||| ||||| | || || ||| Sbjct 745235 GTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGCTTGCCA 745176 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | || ||||||||||| || |||||||||||||| || ||||| || Sbjct 745175 GCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTC 745116 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||||| ||||| || || |||||||||||||| || || | ||| Sbjct 745115 ACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTT 745056 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 745055 TTGACAAAAATCTGCAT 745039 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || ||| || ||||| || ||||| | || || ||| Sbjct 745919 GTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGCTTGCCA 745860 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||||||||| || || || |||||||| ||||| || || || || Sbjct 745859 GCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGCCTTC 745800 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || ||||| || || | || || || || ||||| | || Sbjct 745799 ACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTCAAGGTC 745740 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 745739 TTGACAAAAATCTGCAT 745723 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || | ||| | ||| ||||| || || || || || ||| || ||||| || Sbjct 743885 CTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCA 743826 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 || |||| ||||| ||||||||||| | | |||||||| ||||| || ||||| ||| Sbjct 743825 TCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTA 743766 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || || ||||| || || ||||| || | || || || || || || || ||||| || Sbjct 743765 TCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATT 743706 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || | |||||||| || || ||||| Sbjct 743705 GTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 >seq1829 Length=5883334 Score = 98.7 bits (108), Expect = 2e-15 Identities = 103/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 268919 GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATT 268978 ||||| || |||| |||||| | | ||| || || |||||||||||||| ||||| ||| Sbjct 4219891 GAGGTGCAACTTCCCGAAGCCCGCTTTTTCTATGGCTTCCAGATAGCTATTGAAAACATT 4219832 Query 268979 CATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAA 269038 |||||||| ||||||||||| | ||||| || || ||| | ||| | |||||| | Sbjct 4219831 CATTCAGAAATGTACAGTCTCCTCATAGAAACATACATACAGGATTCAGATGAAAAG-TA 4219773 Query 269039 AGACTATTTTCTT 269051 || || ||||||| Sbjct 4219772 AGTCT-TTTTCTT 4219761 >seq1795 Length=846455 Score = 95.1 bits (104), Expect = 3e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||| || || ||||| | || || ||||| || ||||| |||||| Sbjct 394873 TCCGCCTCTCAACCTTAGAACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACT 394814 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 | |||||||| ||||| | |||||||| ||||| || || || |||||||||||||| Sbjct 394813 CAATGTTCTACCATCTTCCAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGG 394754 Query 104452 TATTCCT 104458 || ||| Sbjct 394753 AATACCT 394747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151369028186628