Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq514 102 4e-17 seq1784 96.9 2e-15 seq601 96.9 2e-15 >seq514 Length=9866887 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 6146254 TTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 6146313 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| ||||| Sbjct 6146314 CTGAGCTAACGGGCC 6146328 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 6167630 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 6167689 Query 11528 CC 11529 || Sbjct 6167690 CC 6167691 Score = 96.9 bits (106), Expect = 2e-15 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||| | |||||||||| ||||||||||||||||||||||||| Sbjct 6168063 AAAAAAAAACCTGGCCCGTAGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACG 6168122 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| ||||| Sbjct 6168123 CTCTAACCAACTGAGCTAACGGGCC 6168147 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 6164486 TTGGCCCGTAGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 6164545 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| | ||| Sbjct 6164546 CTGAGCTAACGAGCC 6164560 Score = 91.5 bits (100), Expect = 8e-14 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 6166582 GGGTCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 6166641 Query 11528 CC 11529 || Sbjct 6166642 CC 6166643 >seq1784 Length=895224 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 386871 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 386930 Query 11528 CC 11529 || Sbjct 386931 CC 386932 >seq601 Length=3052603 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2214488 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 2214547 Query 11528 CC 11529 || Sbjct 2214548 CC 2214549 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261484854834316