Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1769 122 8e-23 >seq1769 Length=991018 Score = 122 bits (134), Expect = 8e-23 Identities = 173/241 (72%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||||| | |||||||| | || ||||||||||| | Sbjct 745278 AAAAATCTGCATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGAT 745219 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || | || | ||| |||| ||| || || |||| || || | ||| Sbjct 745218 GTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTG 745159 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| |||||||| |||||||| || | ||||||||||| || | ||| |||||| Sbjct 745158 CTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTC 745099 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 || ||| || || || | || || || || || || | ||||| ||||| ||||||| Sbjct 745098 -GCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCA 745040 Query 95007 T 95007 | Sbjct 745039 T 745039 Score = 120 bits (132), Expect = 3e-22 Identities = 174/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | ||| | | |||||||| | || ||||||||||| | Sbjct 744366 AAAAATTTGCATACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGAT 744307 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || || | || || ||| |||| ||||| || |||| ||||| | ||| Sbjct 744306 GTTGTAGTCACTGAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTG 744247 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||| ||||||||||| || || | ||||| || || || | | | |||||| Sbjct 744246 TTGATCTGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTC 744187 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | ||| || || || | || || || || |||||||| ||||| || || ||||||| Sbjct 744186 A-CTTGGCTCTACTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCA 744128 Query 95007 TGC 95009 ||| Sbjct 744127 TGC 744125 Score = 120 bits (132), Expect = 3e-22 Identities = 173/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||||| | |||||||| | || ||||| || || | Sbjct 745050 AAAAATCTGCATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGAT 744991 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| ||||| || | ||||| | ||| || | |||||| || |||| || || | | Sbjct 744990 GTTGTAATCACTGA--GTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGT 744933 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||||||||||||||||||||| || || | || || |||||||| | | ||| Sbjct 744932 TGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTG 744873 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | | || || |||| || || ||||| ||||| | |||||| ||||| |||||| Sbjct 744872 TCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGC 744813 Query 95006 AT 95007 || Sbjct 744812 AT 744811 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | |||| | ||||| || | || ||||||||||| | Sbjct 743910 AAAAATTTGCATACCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGAT 743851 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || | || || |||||| | |||||| || |||| || || | ||| Sbjct 743850 GTTGTAATCACTAAGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTG 743791 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||||||||||||||| || || | || || |||||||| | | | |||||| Sbjct 743790 TTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTC 743731 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | | || || || | || || |||||||| || | ||||| || || || ||||| Sbjct 743730 ACTGGGCTCAACTTCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 118 bits (130), Expect = 1e-21 Identities = 176/245 (72%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||||| | |||||||| | || ||||| ||||| | Sbjct 745734 AAAAATCTGCATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGAT 745675 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| ||||| || | ||||| | ||| || | |||||| || |||| || || | | Sbjct 745674 GTTGTAATCACTGA--GTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGT 745617 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 |||||||| |||||||| |||||||| || | ||||||||||| || | | | ||| Sbjct 745616 TGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTG 745557 Query 94946 TCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 || || ||| || || || | || || || || ||||| | ||||| ||||| ||||| Sbjct 745556 TC-GCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTG 745498 Query 95005 CATGC 95009 ||||| Sbjct 745497 CATGC 745493 Score = 116 bits (128), Expect = 3e-21 Identities = 172/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||||| | |||||||| | || ||||||||||| | Sbjct 745506 AAAAATCTGCATGCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGAT 745447 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || | || | ||| || | ||| || || |||| || | | ||| Sbjct 745446 GTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTG 745387 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| |||||||| |||||||| || | ||||||||||| || | ||| |||||| Sbjct 745386 CTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTC 745327 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 || ||| || || || | || || || || ||||| | ||||| ||||| ||||||| Sbjct 745326 -GCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCA 745268 Query 95007 T 95007 | Sbjct 745267 T 745267 Score = 116 bits (128), Expect = 3e-21 Identities = 175/248 (71%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 94762 TTTTTTAAAATTTTACACTC--CTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 ||| |||||| ||| | || | || | || || || || | ||| | ||| |||||| Sbjct 745970 TTTGTTAAAACTTTCTATTCACCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCC 745911 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || || | ||| ||||| || | || || ||| |||| ||| || || |||| || Sbjct 745910 TTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATC 745851 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | | || |||||||| ||||||||||||||||| | ||||| ||||| || | | Sbjct 745850 AGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTGTCA 745791 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | |||||| | | || || || | ||||| ||||||||||| | || || ||||| Sbjct 745790 ATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAA 745731 Query 95000 ATCTGCAT 95007 |||||||| Sbjct 745730 ATCTGCAT 745723 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | || || ||||| || | || ||||| |||| || | ||||||| Sbjct 744107 ACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCCTCC 744048 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || || |||| || | ||||||||||||||| |||||||||||||| || | | Sbjct 744047 AACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCTTGA 743988 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTT 94977 |||||||| ||||| | | | || ||| | ||| || || || | || || ||||| Sbjct 743987 ATTTTTGCTTTGACATTGTCAATGGTATCA-CTTGGTTCAACTTCCAGAGTAATTGTTTT 743929 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||||| ||||| || ||||| Sbjct 743928 GCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 100 bits (110), Expect = 3e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||||| | |||||||| | || ||||||||||| | Sbjct 744594 AAAAATCTGCATGCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGAT 744535 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || | || | ||| || | |||||| || |||| || | | || Sbjct 744534 GTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTG 744475 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| |||||||| ||||| || | ||||||||| ||||| | | || || Sbjct 744474 TTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATC 744415 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | | || || || | ||||| ||||| ||||| | ||||| ||||| || ||||| Sbjct 744414 ACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || |||| ||||| | ||||| || | || ||||| || || | Sbjct 744822 AAAAATCTGCATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGAT 744763 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || | || | ||| || | ||| || || |||| || | | || Sbjct 744762 GTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTG 744703 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| |||||||| |||||||| || | ||||||||||| || | | | ||||| Sbjct 744702 TTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTC 744643 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 || ||| || || || | || || || || || || | ||||| ||||| ||||||| Sbjct 744642 -GCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCA 744584 Query 95007 TGC 95009 ||| Sbjct 744583 TGC 744581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448280043152760