Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq1829 161 1e-35 seq647 152 5e-33 seq1569 136 4e-28 seq1685 116 4e-22 seq514 116 4e-22 seq1917 105 7e-19 seq1700 105 7e-19 seq1173 100 3e-17 seq270 100 3e-17 seq213 93.3 4e-15 >seq1829 Length=5883334 Score = 161 bits (178), Expect = 1e-35 Identities = 253/360 (70%), Gaps = 8/360 (2%) Strand=Plus/Plus Query 574 GTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGATT 633 ||| | | ||| |||| || |||||| ||||| ||| | ||| | |||||||||||| Sbjct 2614723 GTGACATCCCACGCAGTTTTTGATGAAAGCATAGCTTTAATTATACTTTCTGGTTGGATT 2614782 Query 634 TTCCTCTTCAGGATATTCTCCA--GCTCATCCCGA--TGTGGGTAAAAACGTGAGCACTC 689 || | || | | | |||| | | || || ||||| || || | ||| | Sbjct 2614783 CTCTGTTGGAGAACAGTTTCCAAAGTTTCTCTAGACCTGTGG----AAGCGAGGGCAGTT 2614838 Query 690 AAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATT 749 |||||| |||| || ||||||||||| |||||| ||||||||||| ||||| ||| Sbjct 2614839 AAAGAATGCGTGTTCCGCATCTTCATTTTTTCCTGGACAGGATGGGCATTCTGGAGAAAC 2614898 Query 750 ATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGT 809 |||||| |||| || || |||||||||||||| || ||||| || | |||||| || Sbjct 2614899 ATCATGACCAAAGCGATGAAGGTACGCCCGGAAACACCCATGTCCCGAAAGCATCTGCGT 2614958 Query 810 AAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAG 869 || || ||||| || ||||| || |||| || ||||| || | || ||||| || Sbjct 2614959 CAGGTAGTAGTTAACTTCACCATGGTTCCGCTTCAGCCAGACATCTATTTGAGGTATAAG 2615018 Query 870 ACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTTATGCT 929 ||| | ||||| || ||| | || | ||||| || | |||||||||| ||||| Sbjct 2615019 ACGGTTTGTCCACCTGCCAGTTGTTGCCGAGTCCCATTGCATTTGCCATCGATGCATGCT 2615078 >seq647 Length=3060193 Score = 152 bits (168), Expect = 5e-33 Identities = 245/350 (70%), Gaps = 8/350 (2%) Strand=Plus/Minus Query 574 GTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGATT 633 ||||| | ||| |||| || ||| || ||||| ||| | ||| |||||||||||||| Sbjct 2273705 GTGGCATCCCACGCAGTTTTTGAAGAAAGCATAGCTTTAATTATACTCTCTGGTTGGATT 2273646 Query 634 TTCCTCTTCAGGATATTCTCCA--GCTCATCCCGA--TGTGGGTAAAAACGTGAGCACTC 689 || | || | | | |||| | | || || ||||| || || | ||||| Sbjct 2273645 CTCTGTTGGAGAACAGTTTCCAAAGTTTCTCTAGACCTGTGG----AAGCGAGGGCACTT 2273590 Query 690 AAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATT 749 |||||| |||| || ||||||||||| ||||||| ||||||||||| ||||| ||| Sbjct 2273589 AAAGAATGCGTGTTCCGCATCTTCATTTTCTCCTGGACAGGATGGGCATTCTGGAGAACC 2273530 Query 750 ATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGT 809 |||||| |||| || || | |||||||||||| || ||||| || | |||||| || Sbjct 2273529 ATCATGACCAAAGCGATGAAGGTGCGCCCGGAAACACCCATGTCCCGAAAGCATCTGCGT 2273470 Query 810 AAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAG 869 || || ||||| || ||||| || || | || ||| | || | || ||||| || Sbjct 2273469 CAGGTAGTAGTTAACTTCACCATGGTTCGGCTTCAGCTAGACATCTATTTGAGGTATAAG 2273410 Query 870 ACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATC 919 ||| | ||||| || ||| | || | ||||| || | || ||||| Sbjct 2273409 ACGGTTTGTCCACCTGCCAGTTGTTGCCGAGTCCCATTGCATTTACCATC 2273360 >seq1569 Length=1406957 Score = 136 bits (150), Expect = 4e-28 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 682 GAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCT 741 ||| | || || || || |||| |||||||||||| |||||||| ||||||||||| | Sbjct 713618 GAGGAATCGAAAAATACATGCTATGCATCTTCATTAACTCCTGGACAGGATGGGCATCCC 713677 Query 742 GGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAAC 801 | ||| ||||||| || | ||||| || | ||||||||| || |||| || | | Sbjct 713678 GAAGAAACATCATGCCCAAAGTGATGGAGTTATGTCCGGAAACATCCATGTCTCGAAAGC 713737 Query 802 ATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAAC 851 ||||| || || |||||||| |||||||||||| | ||||||| |||||| Sbjct 713738 ATCTGCGTCAGGTAATAGTTAACCTCACCGTGATTTCGGTTTAACCAAAC 713787 Score = 100 bits (110), Expect = 3e-17 Identities = 238/357 (67%), Gaps = 2/357 (1%) Strand=Plus/Plus Query 574 GTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCT-CTGGTTGGAT 632 || || | ||| |||| || |||||||||||| ||| || || ||| | |||| | ||| Sbjct 1311616 GTTGCATCCCATGCAGTTTTTGATGACAGCATAGCTT-TAGTAATATTTTCTGGCTAGAT 1311674 Query 633 TTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAA 692 | || | || | | | |||| || | | | || || | | ||||| || Sbjct 1311675 TCTCTGTTGGAGAACAGTTTCCATAGTTTCTCTAGGCCTGTGGAAGCTAGGGCACTTGAA 1311734 Query 693 GAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATC 752 ||| ||||| || ||||||||||| | |||| ||||||||||| ||||| ||| ||| Sbjct 1311735 GAATACGTGTTCCGCATCTTCATTTTTTTCTGGACAGGATGGGCATTCTGGAGAAACATC 1311794 Query 753 ATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAG 812 |||| | || | || || || ||||| || || || || | | || ||| || | Sbjct 1311795 ATGCCCAAAACGATAAAGGTATGCTCGGAAGCAACCATGCCCCAAAAGCAGCTGCGTCAA 1311854 Query 813 ATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACG 872 || ||||| || |||| || || ||||| ||||| || | || ||||| ||| | Sbjct 1311855 GTAGTAGTTAACTTCACTATGGCTTCGGTTCAGCCAGACATCTATTTGAGGTATAAGATG 1311914 Query 873 ATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTTATGCT 929 | || || || ||| | || | ||||| || | |||||| || |||||| Sbjct 1311915 GTATGTACACCTGCCAGTTGTTGCCGAGTCCCATTGCATTTGCCACTGATGTATGCT 1311971 >seq1685 Length=7351509 Score = 116 bits (128), Expect = 4e-22 Identities = 178/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 676 AAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGG 735 ||||||| ||| ||||| || || || ||||||| |||||| | | | ||||| || ||| Sbjct 4810514 AAACGTGGGCATTCAAAAAATACTTGTTCTGCATTTTCATTAATTTCCGGGCAAGAAGGG 4810573 Query 736 CACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCT 795 |||| | |||| ||||||| | || | ||||| || ||||| || | || || Sbjct 4810574 CACTTCGACGAATCATCATGCCCAAAACGATAAAGATATGCTCGGAAGCATCTATGACCA 4810633 Query 796 GATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTG 855 || | ||| |||| | || || || |||||||| ||| | ||||| | ||| | | Sbjct 4810634 GAGAGCATTTGTGCCAAGTAGTAATTTACCTCACCATGATTACGGTTCACCCAGATACTT 4810693 Query 856 ATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGC 915 || |||||| || |||| |||||||||||| || | | ||||||| | ||| Sbjct 4810694 ATTTGTGGTATAAGTCGATATGTCCATCTACCAGCTGTTGATGAAACCCACTGCATTTGT 4810753 Query 916 CATCGACTTATGCT 929 |||||| ||||| Sbjct 4810754 CATCGATGCATGCT 4810767 Score = 86.0 bits (94), Expect = 6e-13 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 574 GTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTA-TCTCTGGTTGGAT 632 || || | ||| |||| || |||||| ||||| | | || || || ||||||| || || Sbjct 6700828 GTTGCATCCCATGCAGTTTTTGATGAAAGCATAGTTT-TAGTAATACTCTCTGGCTGTAT 6700886 Query 633 TTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAA 692 | || | || | | | |||| || | | | || || || | ||||||||| Sbjct 6700887 TCTCTGTTGAAGAACAGTTTCCAAAGTTTCTCTAGGCCTGTGGAAGCGAGGGCACTCAAA 6700946 Query 693 GAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATC 752 ||| ||||| || ||||||||||| |||||| ||||||||||| ||||| || ||| Sbjct 6700947 GAATACGTGTTCCGCATCTTCATTTTTTCCTGGACAGGATGGGCATTCTGGAAAAACATC 6701006 Query 753 ATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTG 791 |||| | || | || || |||||||| || || || Sbjct 6701007 ATGCCCAAAACGATAAAGGTATGCCCGGAAGCAACCATG 6701045 >seq514 Length=9866887 Score = 116 bits (128), Expect = 4e-22 Identities = 176/249 (71%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 676 AAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGG 735 || || | ||||| ||||| || | || ||||||||||| ||| ||| ||||||||| Sbjct 2043832 AAGCGAGGGCACTTGAAGAATGCGCGTTCCGCATCTTCATTTTCTCATGGACAGGATGGG 2043891 Query 736 CACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCT 795 || |||| |||| || |||| | |||| || || |||||||| |||| || || || Sbjct 2043892 CATTCTGTGGAAC-ATAATGCCCGAAGCGATGTAGGTACGCCCGAAAACTTCCATGACCC 2043950 Query 796 GATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTG 855 || | |||||| || || || ||||| | ||||| | | |||||||||||||| | Sbjct 2043951 GAAAGCATCTGCGTCAGGTAGTAGTTAGCTTCACCATAGTTTCGGTTTAGCCAAACATCA 2044010 Query 856 ATCCTTGGTATGAGAC----GATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAG 911 || || ||||||| | | ||||| || ||| | || | ||||| ||| Sbjct 2044011 ATTTGCGGCATGAGACGGTAGGTATGTCCACCTGCCAGTTGTTGCTGAGTCCCATAGTAT 2044070 Query 912 TTGCCATCG 920 ||||||||| Sbjct 2044071 TTGCCATCG 2044079 >seq1917 Length=533231 Score = 105 bits (116), Expect = 7e-19 Identities = 170/241 (71%), Gaps = 9/241 (4%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGG 744 |||||||| || | | ||||| ||||||||| | | || | || |||||| || Sbjct 105482 CACTCAAAAAATATTTTCTCTGTATCTTCATTAATTTCTAGACATAATGGGCTTTCCAAA 105423 Query 745 GAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATC 804 | ||||||| |||| |||||||| ||||||||||| || |||| ||| |||| Sbjct 105422 TATACATCATGCCCAAAGCGATGGAGATATGCCCGGAAACATCCATGTCATGAAGGCATC 105363 Query 805 TGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTG-- 862 || | || |||||||| ||| |||| ||| | | ||| | ||| || || || ||| Sbjct 105362 TGCATCAGGTAATAGTTAACCACACCATGATTTCCGTTAAACCATACATTTAT--TTGAT 105305 Query 863 GTATGAGACGATGCGTCCATCTACCATTCACTGTGGC--ATCCCACTGTAGTTGCCATCG 920 |||| ||||||| ||| | || ||| |||| || | |||||| | ||||||||| Sbjct 105304 GTATAAGACGATATGTCTACCTGCCA---GCTGTTGCAGAGTCCACTGCATTTGCCATCG 105248 Query 921 A 921 | Sbjct 105247 A 105247 >seq1700 Length=1360743 Score = 105 bits (116), Expect = 7e-19 Identities = 247/366 (67%), Gaps = 15/366 (4%) Strand=Plus/Plus Query 574 GTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTA-TCTCTGGTTGGAT 632 || || | ||| |||| || |||||| | ||| ||| | || || ||||||| ||||| Sbjct 916952 GTTGCATCCCATGCAGTTTTTGATGAAAACATAGCTT-TCGTAATACTCTCTGGCTGGAT 917010 Query 633 TTTCCTCTTCAGGATATTCTCCA--GCTCATCCCGA--TGTGGGTAAAAACGTGAGCACT 688 | || | || | | | |||| | | ||| | ||||| || || | |||| Sbjct 917011 TCTCTGTTGGAGAACAGTTTCCAAAGTTTTTCCAGGCCTGTGG----AAGCGAAAACACT 917066 Query 689 CAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAAT 748 ||||| ||||| || ||||||||||| ||||||| |||||||| || ||||| | | Sbjct 917067 TGAAGAACACGTGTTCCGCATCTTCATTTTCTCCTGGACAGGATGGACATTCTGGAGGAA 917126 Query 749 TATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCT--G 806 ||||||| | || | || || ||||| || || || || || || | ||||| | Sbjct 917127 AATCATGCCCAAAACGATAAAGGTATGCCCGAAAGCAACCATGCCCCGAAAGCATCTTCG 917186 Query 807 T---GTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGG 863 | ||| ||| ||||| || ||| | || | |||||||||| || || || || Sbjct 917187 TCAAGTAGTATAGTAGTTAACATCAACATGGGTTTGGTTTAGCCAGACATTTATTTGAGG 917246 Query 864 TATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACT 923 ||| ||| | | ||||| || ||| | || | ||||| || | |||||| ||| Sbjct 917247 TATAAGATGGTATGTCCACCTGCCAGTTGTTGCCGAGTCCCATTGCATTTGCCACCGATG 917306 Query 924 TATGCT 929 |||||| Sbjct 917307 TATGCT 917312 >seq1173 Length=1849595 Score = 100 bits (110), Expect = 3e-17 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 676 AAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGG 735 ||||||| ||| ||||| || || || ||||||| |||||| | | | || || || ||| Sbjct 729131 AAACGTGGGCATTCAAAAAATACATGTTCTGCATTTTCATTAATTTCCGGACAAGAAGGG 729190 Query 736 CACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCT 795 |||| | |||| ||||||| | || | ||| | || ||||| || || || || Sbjct 729191 CACTTCGACGAATCATCATGCCCAAAACGATAAAGACATGCTCGGAAGCATCCATGACCA 729250 Query 796 GATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTG 855 || | ||| || || | || || || |||||||| ||| | |||| | ||| | | Sbjct 729251 GAGAGCATTTGCGTCAAGTAGTAATTTACCTCACCATGATTAGGGTTCACCCAGATACTT 729310 Query 856 ATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || |||||| || |||| |||||||||||| Sbjct 729311 ATTTGTGGTATAAGTCGATATGTCCATCTACCA 729343 >seq270 Length=4003280 Score = 100 bits (110), Expect = 3e-17 Identities = 169/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 676 AAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGG 735 ||||||| ||| ||||| || || | ||||||| |||||| | | | || || | ||| Sbjct 1557737 AAACGTGGGCATTCAAAAAATACATTTTCTGCATTTTCATTAATTTCCGGACAAAAAGGG 1557678 Query 736 CACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCT 795 |||| | |||| ||||||| | || | ||||| || | ||| || || || || Sbjct 1557677 CACTTCGACGAATCATCATGCCCAAAACGATAAAGATATGCTCAGAAGCATCCATGACCA 1557618 Query 796 GATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTG 855 | | ||| |||| | || || || |||||||| ||| | ||||| | ||| | | Sbjct 1557617 CAGAGCATTTGTGCCAATTAGTAATTTACCTCACCATGATTACGGTTCACCCAGATACTT 1557558 Query 856 ATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGC 915 || |||||| || |||| |||||||||||| || | |||||||| | |||| Sbjct 1557557 ATTTGTGGTATAAGTCGATATGTCCATCTACCAGCTGTTGATGAGTCCCACTGCATTTGC 1557498 Query 916 CATCG 920 ||||| Sbjct 1557497 CATCG 1557493 >seq213 Length=4430850 Score = 93.3 bits (102), Expect = 4e-15 Identities = 163/238 (68%), Gaps = 16/238 (7%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGG 744 |||| || || ||||||| ||||| |||||| ||| ||| | || | | Sbjct 2782579 CACTTGAAAAATACGTGCTTTGCATTTTCATTAACTTCTGTA----------ATTCCGAG 2782530 Query 745 GAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATC 804 || |||||||| | | || ||||||| ||||||||| | || ||||| | | |||| Sbjct 2782529 AAAACATCATGCTGGAAACGACGGAGATATGCCCGGAAAAATCCATGTCCCGCCAGCATC 2782470 Query 805 TGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGT 864 || | || |||| | ||||||| || | | || || |||||| || || |||| Sbjct 2782469 TGCGACAGGGAATAACTAACCTCACTATGGTTTCTGTCTAACCAAACATTTATTTGTGGT 2782410 Query 865 ATGAGACGATGCGTCCATCTACCATTCACTGTGGCA---TCCCACTGTAGTTGCCATC 919 |||||||||| ||| | ||||| ||||| ||| || ||||| | |||||||| Sbjct 2782409 ATGAGACGATACGTTTACTTACCA---ACTGTTGCAGCGTCTCACTGCATTTGCCATC 2782355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50949227074026